| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_20342 |
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| Symbol | GltD |
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| ID | 7201030 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011676 |
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| Strand | + |
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| Start bp | 786641 |
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| End bp | 788972 |
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| Gene Length | 2332 bp |
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| Protein Length | 580 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | synthase of glutamate synthase |
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| Protein accession | XP_002180120 |
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| Protein GI | 219118705 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGACCGGGCA AAAAATAGTA CGACGAAAAT ATGTTGAGCA GCGTTTCCCG TCGAGTCTTG
AGCCACCACC AGGCCCGCAG GTTCAAGAGC ACTCACGTCA AAGGCTCTTC GTCCGCAGGC
CACGGCCCTA TTGGCGAAGA TGGGCGTCAT GAAATCTGGA GAGAAGGCAT TTACGATCAC
GACAACGAAC CAAAGTGAGT ATGGGATTCG TCTGTTCTTG CGTTTCGAAG ATTTGCGTTC
TGGTAGGAAG TCTACGTAGC CCCTACACTG GATTAGGTTA TGGGGCGGGT CGAACACAGA
AAAAAGGCTC TCCCTCCGAC CAGAACTTCT TCCCGATTTG CGGAGGCTCA AGGCGTTTCC
ATCCAGGCTA GCCTCAGTTA GTTCATTGCT ATTATTATGA TGGCGTACTG CAGATGGCGG
GGTCGATATT CCTCGATCTA GCCTTCCTGT CGTACTTGGG AAAAACAATG AGAAAGTCTA
GTCGCCTGCT CCGCTTCGTT CACGTCGCGA CGCTTCTTTC GATGTAACTT CACTCTCGGC
AACAACTTAC ATCTTATTGT CCTACCTTTC CTTCACATTA GAATCAAGCG TCGTGATGGT
TCCTATTCCT CTATTGAGAA GCTGCGTGGT TTTCTGAATT ACGAGCGCAA CCCCGAGCCG
TACCGAAAGC CGTTGGAGCG TGTCATGGAC TGGGGTGAGC TCAATCCCAC GGAGGAAGAC
GAGCTCCACC ACACGGACCT GGAGCGCAAG GTCCAGGCCG CACGGTGCAT GGACTGCGGC
ACGCCTTTTT GCCAAACCCA TACGGGATGT CCCGTCAACA ACCTTATTCC CGAATGGAAC
AATCTCGTTT ACAATGGGCA ATGGGAAGAA GCCATCGATC GATTGCACAA AACCAACAAC
TTTCCCGAAT TCACCGGTCG TGTTTGTCCG GCTCCTTGTG AGGGATCCTG CGTGGCTGGT
CTCGTTGACA GCCCCGTCAC AATCAAAAAT ATTGAATACG CCATTGTCGA CCGGGCGTGG
AAGGACGGAC TCATTACGCC TCGCATTCCC AAGGAACGCA CCGGCATGAC GGTGGCGGTG
ATTGGTTCAG GCCCGGCTGG ATTGGCGGCT GCCGATCAAC TCAACCAGCT CGGGCACAAA
GTTACTGTCT ACGAACGCGC CGATCGAGTC GGAGGACTGC TGATGTACGG AATCCCCAAT
ATGAAACTCG AAAAGGAGAC CGTTGATCGT CGCGTTAATT TGCTGCGGGA GGAAGGCATC
GAATTTGTTA CCAACGCAGA CATTGGCAAC AATGTAGATA TCAACGAGCT TCGTTCCAAT
CACGACGCAT TGGCGTTGTG TATGGGAGCA ACCAAACCTC GTGATTTGCC CGTTCCCGGC
CGTGAACTGA AGGGCGTTCA TTTCGCTATG GTATGTAGGT CGAATGTTCC GGATGATGTC
CCTTCCTTCT CTCTCGTACT AACACTGGCT TTTGCTTTAA TGTCAGGAAT TTTTGACGGC
CAATCAAAAG CGTTTACTAA TGACCAAGGA AGGAACACTG GAATCCAAGT GGGAAAAGGA
TAATTTCATA ACTGCCGCGG GTAAGGATGT TATAGTAATT GGTGGTGGAG ACACCGGGAC
GGACTGCATT GGTACCAGTA TGCGCCACCG CTGCAAATCC GTCACTAACT TTGAGCTGAT
GCCACAACCA CCCATGGATC GTGCCACAGA CAATCCTTGG CCACAGTGGC CGCGCGTTTT
TGGTCTAGAC TACGGCCACG CCGAAGTCCA GGCCGTTTTT GGCAAGGACC CGCGAGTCTA
CTCTGTCATG ACCAAGGAAT TCATTGGTGA TGATCAAGGG AGAGTCAAGG CGCTGATTAC
ACAGGATGTG GAGATTTCTG ACAAGGGCCC CAAAGCGATT GAAGGATCAG AACGGGAGTT
CCCGTGTGAT CTGGTTGTCC TTTCCATGGG GTTTGTGTCG CCCGAAGACT ATGTGGTTGG
TGAATTGGGA TTAGATACGG ATCAGCGCAA CAACATCCAC GCCACGTACG GTGATTTCCG
TACCAATGTT GAAGGCGTTT TTGCGGGCGG TGATTGCCGA CGTGGTCAAA GTTTGGTGGT
GTGGGCAATC AACGAAGGCC GAGGTATGGC GGCTTCGTGT AACGAGTACC TGCAGGCCAA
GCGTGATACC AAGTTCTCTC CCAGCCATCA AACTGGAGTG TTCCATAATC TCAGCAGTCT
TTCCCCCAAG ATGTAAACTG ACGGTCTTTC ACCCACTACC GTGGTGTATT TTTGCTTTCG
ATCAACTTAA TGGGCACGTT AACTCTAGAA GTTGGCGTGA ACTTTCTTTC TT
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| Protein sequence | MLSSVSRRVL SHHQARRFKS THVKGSSSAG HGPIGEDGRH EIWREGIYDH DNEPKIKRRD
GSYSSIEKLR GFLNYERNPE PYRKPLERVM DWGELNPTEE DELHHTDLER KVQAARCMDC
GTPFCQTHTG CPVNNLIPEW NNLVYNGQWE EAIDRLHKTN NFPEFTGRVC PAPCEGSCVA
GLVDSPVTIK NIEYAIVDRA WKDGLITPRI PKERTGMTVA VIGSGPAGLA AADQLNQLGH
KVTVYERADR VGGLLMYGIP NMKLEKETVD RRVNLLREEG IEFVTNADIG NNVDINELRS
NHDALALCMG ATKPRDLPVP GRELKGVHFA MEFLTANQKR LLMTKEGTLE SKWEKDNFIT
AAGKDVIVIG GGDTGTDCIG TSMRHRCKSV TNFELMPQPP MDRATDNPWP QWPRVFGLDY
GHAEVQAVFG KDPRVYSVMT KEFIGDDQGR VKALITQDVE ISDKGPKAIE GSEREFPCDL
VVLSMGFVSP EDYVVGELGL DTDQRNNIHA TYGDFRTNVE GVFAGGDCRR GQSLVVWAIN
EGRGMAASCN EYLQAKRDTK FSPSHQTGVF HNLSSLSPKM
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