Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12267 |
Symbol | |
ID | 7201094 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 455255 |
End bp | 456023 |
Gene Length | 769 bp |
Protein Length | 227 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180239 |
Protein GI | 219118945 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGTT TGACAGAACA AACGTGGAAG GAGAAACTGT CTACCACCTT TGAGTCAGAA TCCTTCGCGA AGTTAGCCGC GTTTCTAGAG ATTGAAAGAA AGATGGGGGC AACGATCTAT CCGCCGAAAG AGGACATATT CTCAGCGCTC AACTTATGTC CGTTCGACAA AATCAAAGTT GTCATTGTAG TAAGTGGCAA GCGCGGTATG CAGTTAGAAC CATCCAAACA TCGCCATTGG TCTCTCACAC GAGTTCTGCT GCCCTTCGTC TCAGGGACAA GATCCGTACC ACGGACCGGG CCAAGGCCAT GGTCTGGCTT TTTCCGTCCG TCGTGGCGTA AAGCCCCCTC CGTCGCTGCA AAATGTTTTT CGCGAGGCCA TAGATGACGT TGGTATTGCT ACTCCGATGC ACGGAAATCT TGAGCATTGG GCGAGACAAG GTGTTCTCCT TCTGAATACA GTGTTGACCG TACGTCGTGG TGAAGCCAAT AGCCATGCTG GACAAGGTTG GGAGCGCGTC ACCGATGCCA TCATTCATGT TGTCAACGCA AAATCAGACG GAGTAGTGTT TTTGCTTTGG GGCAATCCAG CGCATAAGAA GGCAGCCAGT GTTGACTCGG CAAACCACTT CATTATTCGA AGCAGCCACC CCAGCCCTTT AGGGGCCACA AAAACGAAGT CGCCTTTTCT AGGATCTCGC TGTTTCAGTC GAGCGAACGA CGCCTTGAAG AAAATGGGAA AGGATCCGAT CGATTGGAAC GTCAAGTAG
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Protein sequence | MASLTEQTWK EKLSTTFESE SFAKLAAFLE IERKMGATIY PPKEDIFSAL NLCPFDKIKV VIVGQDPYHG PGQGHGLAFS VRRGVKPPPS LQNVFREAID DVGIATPMHG NLEHWARQGV LLLNTVLTVR RGEANSHAGQ GWERVTDAII HVVNAKSDGV VFLLWGNPAH KKAASVDSAN HFIIRSSHPS PLGATKTKSP FLGSRCFSRA NDALKKMGKD PIDWNVK
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