Gene PHATRDRAFT_12267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12267 
Symbol 
ID7201094 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp455255 
End bp456023 
Gene Length769 bp 
Protein Length227 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180239 
Protein GI219118945 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGTT TGACAGAACA AACGTGGAAG GAGAAACTGT CTACCACCTT TGAGTCAGAA 
TCCTTCGCGA AGTTAGCCGC GTTTCTAGAG ATTGAAAGAA AGATGGGGGC AACGATCTAT
CCGCCGAAAG AGGACATATT CTCAGCGCTC AACTTATGTC CGTTCGACAA AATCAAAGTT
GTCATTGTAG TAAGTGGCAA GCGCGGTATG CAGTTAGAAC CATCCAAACA TCGCCATTGG
TCTCTCACAC GAGTTCTGCT GCCCTTCGTC TCAGGGACAA GATCCGTACC ACGGACCGGG
CCAAGGCCAT GGTCTGGCTT TTTCCGTCCG TCGTGGCGTA AAGCCCCCTC CGTCGCTGCA
AAATGTTTTT CGCGAGGCCA TAGATGACGT TGGTATTGCT ACTCCGATGC ACGGAAATCT
TGAGCATTGG GCGAGACAAG GTGTTCTCCT TCTGAATACA GTGTTGACCG TACGTCGTGG
TGAAGCCAAT AGCCATGCTG GACAAGGTTG GGAGCGCGTC ACCGATGCCA TCATTCATGT
TGTCAACGCA AAATCAGACG GAGTAGTGTT TTTGCTTTGG GGCAATCCAG CGCATAAGAA
GGCAGCCAGT GTTGACTCGG CAAACCACTT CATTATTCGA AGCAGCCACC CCAGCCCTTT
AGGGGCCACA AAAACGAAGT CGCCTTTTCT AGGATCTCGC TGTTTCAGTC GAGCGAACGA
CGCCTTGAAG AAAATGGGAA AGGATCCGAT CGATTGGAAC GTCAAGTAG
 
Protein sequence
MASLTEQTWK EKLSTTFESE SFAKLAAFLE IERKMGATIY PPKEDIFSAL NLCPFDKIKV 
VIVGQDPYHG PGQGHGLAFS VRRGVKPPPS LQNVFREAID DVGIATPMHG NLEHWARQGV
LLLNTVLTVR RGEANSHAGQ GWERVTDAII HVVNAKSDGV VFLLWGNPAH KKAASVDSAN
HFIIRSSHPS PLGATKTKSP FLGSRCFSRA NDALKKMGKD PIDWNVK