Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_6711 |
Symbol | |
ID | 7200409 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 819708 |
End bp | 820358 |
Gene Length | 651 bp |
Protein Length | 189 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179922 |
Protein GI | 219118288 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00445618 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CAATATGTTA TCGGCGTGGA CGAGGCTGGA CGGGGTCCGC TGGCGGGACC GGTGGTTGCC GCCGCCGCCG TTGTACCGAT TGATATTGTT GGTATCGCCG ACAGCAAAAC TCTTACGCGT GAGTCTGTAA GGGAAGAACT GTACGAAAAG ATTGTCTCCT CAGACAATGT CCGATGGGCA GTTGCGGTGA TCGACTCGGC TCGCATTGAT GAAGTCAATA TTCTGCAAGC AACATTGCAA GGAATGCGTC TGGCAGCGTC AGCCGTCGCT GGAATAGTTA GTGAAGATAT TGCTGACTGT GAGTCTGCGT GCGTCACAAT TTCGGGTTGT TATGTTGTCA CTGGGGGCAC ACCATTAAAG TCTGAAGTTC CTGACAATGC CTTTTATGCC TTGCTTGATG GCAACCGACT TCCGAAAAAA ATGGCAATGC GTGTCGAAAC GATGGTGAAA GGTGACTCGA GAGAATATTC AATCGCAGCC GCCTCAATAT TGGCCAAGGT GACTCGCGAC CGCTTAATGC ACGGGTACGA TAAGTTGTAT CCGGAGTACA ACTTGGCACA GCATAAGGGG TATCCAACGG CAGCACATAT GGACGCCGTC CGCAAGTACG GTGCTTCGCC GATTCATCGG CGGACATTCG CTCCCTTGAA G
|
Protein sequence | QYVIGVDEAG RGPLAGPVVA AAAVVPIDIV GIADSKTLTR ESVREELYEK IVSSDNVRWA VAVIDSARID EVNILQATLQ GMRLAASAVA GISEVPDNAF YALLDGNRLP KKMAMRVETM VKGDSREYSI AAASILAKVT RDRLMHGYDK LYPEYNLAQH KGYPTAAHMD AVRKYGASPI HRRTFAPLK
|
| |