Gene PHATRDRAFT_5902 details

Gene Information

• Locus tag: PHATRDRAFT_5902
• ID: 7200404
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 802070
• End bp: 802804
• Gene Length: 735 bp
• Protein Length: 213 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002179719
• Protein GI: 219117865

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACGGGCCTTT CATTCCTGTT GGATGACGGG ACGCGAAAAT CCCACTCCAT CGCGGAAAAC 
ACAGCTTTCG TCTCGGGATT CTTCAAGGGC CTTAGTACTC GCGATTCCTA CCGTACTTTG 
GTCACTAGCT TGTACTACGT GTATAATACC ATGGAAACCG CGTTCGATAC GGTTGAGGAC 
GTCAGCGTGC AAACCTTGGA CGATGATGAG CTACGTCGGC TCGCGAGCCT CGAACGGGAC 
ATGGAATACT TTTACGGTTT GTCTTGGAGG GATAGTCTAC CTTCACCGTC GCTCGCAACG 
CAAGCATACG TTGCCCGTAT TCAGCAAGTT GCTCAGAACA AACCTTACAA CCTGATTGGA 
CATCAGTATT CGCGATACTT AGGTAAGGAG ACAGCTCGAA AGTGAAACCG GCAACGCAGC 
AATCATTTTA GCACTCTGAG AAAAACGAAA CAACCAACAT ACATTATCTC TCTTGTAGGC 
GACTTGTTTG GTGGTCAAAT GATGAAGGGC ATGGCAACTC GGAGCCTAAA TCTGGAGGAC 
GGCCAGGGTG TTTCGTTCTA CGAATTTGAC AAAATTGATG ACACGAAGGA ATTCATAACC 
GATTGGTACA CTAGGTTGAA CGCTTTGGAC CTAACTGATG CGCAAAAGAA AGAGATTGTA 
GACGAAGCAA ACTACGTTTT TGGTCTTAAC ATTGCCATTT TTGAAGAGTT GGAAGGCTCA 
CCTTTTAAGG CCATG 

 

Protein sequence

TGLSFLLDDG TRKSHSIAEN TAFVSGFFKG LSTRDSYRTL VTSLYYVYNT METAFDTVED 
VSVQTLDDDE LRRLASLERD MEYFYGLSWR DSLPSPSLAT QAYVARIQQV AQNKPYNLIG 
HQYSRYLGDL FGGQMMKGMA TRSLNLEDGQ GVSFYEFDKI DDTKEFITDW YTRLNALDLT 
DAQKKEIVDE ANYVFGLNIA IFEELEGSPF KAM