Gene PHATRDRAFT_45622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45622 
Symbol 
ID7200662 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp744028 
End bp745130 
Gene Length1103 bp 
Protein Length305 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179905 
Protein GI219118253 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.885288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGTTACTCAC TTTGATTTGC CACGGATTCA TACTACCATG ACAACTCCAG CTTTTGGTCA 
AGCCCTGTCG CCCGAACCCA CAAACGCCTT TGCCGTGGCG GAAGGCGTAC CGGTGTCCAA
GCCTGATCCG ACTCCTACCC CCGGCCTGCC CATGCTCGCC GGATTCGAGC TCTGGGTCCC
TCCCAAGCCA AACGTTTACG CGGATGGTTT GCCCGTTTAC GAAATTCTTG GAACCGACGC
GCAGATTGTT CAGTTGCCCC TGCGGGCCCG ACGACAAGTC ATGTGTTTCT CCGGCGCCAT
GGCCTACATG AGTGATGGTA TGAAAATGGA AGCCAAACTG GCGGGTCTCG GAAAAACATT
TGGTCGACTC GCTGGCGGTG GATCCTTGTT TCAGTTGACC TACACCAACG AAACGGATCA
AGATGGTTAC ATTGCCATGA CTCCGGATTA TCCGGGGGTG ATTGTACCCA TCAATATGGC
GAGCTGTCCG GCAGGAAAGA TTGTCACCAT GAGAGACTCT TTTCTTTGCG CAACCGTTGG
CGTGGATAAT TTGACGACTG AAGTTGGAGC TGGATTCAAT CCGGCCTCAA GTATCGGTAG
CTTCCTATGC AGCGGCATTG ATTTTATCGT ACAAACCGTA AGCAACGGTG AATGGGTAAG
TGCAGCTTTC CAACGTAGCC ATTCAGCCGC AAAACTATAA AACCAATAAC TGCTCTTCTC
TACTGGTAGG CGTTCCTTAT GGCCATGGGA ACTGTGATCC AGAAGGTAAG TCAGGTGAAC
TTCCATCCAT CCCCACTGAC ATTTATTTCT CAATCACTGA ATTCTTTCGT TTTTGCCAGA
ACCTTCAACC AGGTGAAAAA CTTTTGGTTG ACACTGAATC TATTCTTTGC TTTGAATCAT
CGGTCACCAT TGATATCCAA TGGGTAGGCA ACGTGGCTGC CATCTGTTGC GGTGGAGAAG
GTCTCTTCAA TACTACCATG ACTGGTCCGG GAAAGATATG GATGCAAAGC ATGAGTATTG
ATAAAATGCG TACACTCTTT CCACCTAAAG TCTCAAGCTC GGGCGGCGGC GACTCCGGCG
ACGGAGGTGG AGGCGGGGAA TAA
 
Protein sequence
MTTPAFGQAL SPEPTNAFAV AEGVPVSKPD PTPTPGLPML AGFELWVPPK PNVYADGLPV 
YEILGTDAQI VQLPLRARRQ VMCFSGAMAY MSDGMKMEAK LAGLGKTFGR LAGGGSLFQL
TYTNETDQDG YIAMTPDYPG VIVPINMASC PAGKIVTMRD SFLCATVGVD NLTTEVGAGF
NPASSIGSFL CSGIDFIVQT VSNGEWAFLM AMGTVIQKNL QPGEKLLVDT ESILCFESSV
TIDIQWVGNV AAICCGGEGL FNTTMTGPGK IWMQSMSIDK MRTLFPPKVS SSGGGDSGDG
GGGGE