| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45464 |
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| Symbol | |
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| ID | 7200567 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011675 |
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| Strand | + |
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| Start bp | 243988 |
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| End bp | 245736 |
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| Gene Length | 1749 bp |
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| Protein Length | 467 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179611 |
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| Protein GI | 219117639 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000560804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TGCTATTCCG GATTGTGTCG ATCTTTCTGT AGAAGCTGGT ATCTTCATTG TTCGGTGACT
TACAACCATG GTACGATGTA GAAGCGTAAA TCAAGAGATG GTCGTTCTGT GTAGTCGTCC
CAATGCTTGG CGGCTGCGTT CTTGCTTTTT TGACCGGAAA AGAGGTCATC AGCAAAGCAC
TCTCGCATTC GTTTAAAATC GGTGGTCGCC CCCGCATCTT TCTGATCACT CTCTTTCCTA
CCTTATTTCC CAGGCCTCCC TTGTTACATG CGTAATTACC TCCGCCGGAT GGTGCTTTTG
CACCGCCTGT GCTTCTCTAC TGGGAGCCTG CTGCGGCAAC GACAAGGCCT CGACGATTCC
ACCAAGCGTC ACTTCCGGAC GGCGACGTTC GGTGCTACTT CTGTTTTTTT CGATTGCGAT
GGCGCTCGTT TTCCAGTACG GAATCGCCCC CGCTATAGTT GACGCCAACG ATTTGACTAG
CTTTGTTAGG GACAAGTGGA CGGATGGATG TTCCCAGTAT GTCGACATCG ACGTGGTCAA
GTCTTGTGCT GGCAACAATG GTGTTTATCG CGTATCGGCT GCTTCGACGC TATTCTTTGC
ATTCGCGGCG CTGGGAGCTC TACTTAAACC CACGGCCAAT CGAGAAGCAT GGCCGGCCAA
ATACACTCTC TACTTCTTTC TCTGTATCGT CACTATTTTC ATTCCCAATG ATCCGCTTTT
TTCTGACGCC TACTTGAACA TTGCACGTAT CGGCGCAGTC CTTTTCATTG TTGTTCAGCA
GCTTGTCATT GTTGACATGG CTCACGAATG GAATGACAGC TGGGTCGCTA AGGCGGATGC
CGCAGAAGCA CAGGAGGCTG GGTCCGGGAA AAGGTGGCTC GGTGCTATTG TGACTGCTTG
CATAATGCTC TTTGGAATAT CCATCATTGC AATAGGCGTC ATTTTTTCTC GCTTCACGGG
ATGTGGCACA AACAATGGAT TTATTACTGT CACGCTTGTG CTCGGCGTCT CAATTGTCGG
TGCGCAGATG TCTGGCGAAG AAGGTTCGTT GCTAGCCAGT GCCTGCGTCT TTGCGTGGTC
TGTGTTTTTG TGCTACACAG CCGTTTCCAA GAACCCTGAT GCATCCTGTA ATCCTATGCT
GGGCGAAATG GATACTGTGA GTATTGTGCT GGGCTTGACC GTGACGGCAA TTAGCCTTGG
ATGGACGGGA TGGTCGTACA CGGCCGAAGA CAAGCTGCGG TCGTCTTCTG AAGAGGAAAG
CGCTGCTGCA GCCACGGCCA GGGCCAGTGA CGACTCCGAG AAAGATGTCA GGCGGGACGT
CACAGGTGTG GTCACAGGCA ACGACTATGG AACGCAAGAC GACGAAGAGC AAGCTAACAG
TGCGGGTCAT GCCGAAGTGG ATGAATCAGT CTTGAACAAT CCTAGCCGTC TATCCAATTC
ATGGAAGCTG AACGCCATTC TAATGAGTGT ATCATGTTGG AAGGCTATGG CTCTAACCAA
TTGGGGCGCG ATTGTGGCCA ATGGCAATGC TGCTAATCCT CAAGTCGGCC GTGTTGGGAT
GTGGATGGTT ATTGCCTCGC AATGGCTTGT TCTGACGCTG TACTTGTGGA CATTGCTGGC
ACCGAGACTC TTTCCCAATC GCGAATTTGG CTGACTTTGT CTGATTTGCA GGATTGTTGG
AGATAACAGC AATGTTTCAC AATATTGTAT AAGTTGACGG TCTAATATAG AGAGGCGCTG
GATAAACGG
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| Protein sequence | MASLVTCVIT SAGWCFCTAC ASLLGACCGN DKASTIPPSV TSGRRRSVLL LFFSIAMALV
FQYGIAPAIV DANDLTSFVR DKWTDGCSQY VDIDVVKSCA GNNGVYRVSA ASTLFFAFAA
LGALLKPTAN REAWPAKYTL YFFLCIVTIF IPNDPLFSDA YLNIARIGAV LFIVVQQLVI
VDMAHEWNDS WVAKADAAEA QEAGSGKRWL GAIVTACIML FGISIIAIGV IFSRFTGCGT
NNGFITVTLV LGVSIVGAQM SGEEGSLLAS ACVFAWSVFL CYTAVSKNPD ASCNPMLGEM
DTVSIVLGLT VTAISLGWTG WSYTAEDKLR SSSEEESAAA ATARASDDSE KDVRRDVTGV
VTGNDYGTQD DEEQANSAGH AEVDESVLNN PSRLSNSWKL NAILMSVSCW KAMALTNWGA
IVANGNAANP QVGRVGMWMV IASQWLVLTL YLWTLLAPRL FPNREFG
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