Gene PHATRDRAFT_45446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45446 
SymbolHY2 
ID7200684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp173938 
End bp174966 
Gene Length1029 bp 
Protein Length342 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179595 
Protein GI219117606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.505627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTGG TTCCTGCGTG GACCATGATG ACACGCAATG CTATATTCTC TGCTCGAAAC 
CCTTCACATT TCTTGGAGGT CACGGCGCTC TTCTGTATAC TACTAGCGAG CGGAAGGGGC
GCCCGAACCA ACACAGCTTT TGTCAATCCA CAGAATCCGC GCAACGGATT GACTTTCACT
TCATCGTTCT CCGGTACCAG CCAACATGCC GGCAGAGTGA CGGTTAATGA GGAGAATTTG
GCTTTACCCA CTGGTTCCGG ACTATACCGG GAATTTTCCC GACACGCTTG GGAAAAATTA
CAATCATCGG GGCTTTTTGT GCAGGAACCG GTGGAGGAGG AATGTGCGTC GAACACGGCA
CCTGCCCGTG GCCTTCCGTC CGGCAGTGTC GTGCAAATGG AGGTCCAGGC ATTGCGCGGT
TCCCTCCCCC AAGTCGCCTA CGCTAGGTAC GCCTTACTGG AAACTTTGAA AGCCGGAAAT
GACGCGAATG TCACGCATCA CGACGGAATC CAAGTCTTGA ATTTGGTGAT CTTTCCCTCA
ACCACCACGG ACCTACCAGT GTTCGGCGCC GATTTCGTTT CTTTACCGGG GGGAAAGCAT
TTGTTGCTAC TGGATGCCCA GCCAATGACA GAAGATGTAC ACTACGAACA CTATTGGAGT
GATTGGTACC AGTCGAACCA CATTTCCGAG ATTTTCCCCT GGGGTGGGGA TATGCCAGAG
GCGGTCCAAC GCTACGTGTC GAGCAAGGCA CTGTGGACAC GTATGGCATC CAGCGAAGAC
AACGCCGGAG AGAAAAGAAA TCCTGTAATC ATTATTCAAA CTGATTTGAT GGCAGCTTTC
CAAGCCCACT TGGAGGTGTA TATACAGCTG CTGCACGATT ACACTGACTT GGAGTCGAAG
GACAACTGGA GTGCGGAATA CCTCGACTAT CGACTTACCA ATGATCCCGC TCGACCTATG
CTGAAGTCTT TGTACGGCGA GGAATGGACC GAGCGCGTTC TGAAAACCGT GCTATTCCCA
TCGCCATAG
 
Protein sequence
MKLVPAWTMM TRNAIFSARN PSHFLEVTAL FCILLASGRG ARTNTAFVNP QNPRNGLTFT 
SSFSGTSQHA GRVTVNEENL ALPTGSGLYR EFSRHAWEKL QSSGLFVQEP VEEECASNTA
PARGLPSGSV VQMEVQALRG SLPQVAYARY ALLETLKAGN DANVTHHDGI QVLNLVIFPS
TTTDLPVFGA DFVSLPGGKH LLLLDAQPMT EDVHYEHYWS DWYQSNHISE IFPWGGDMPE
AVQRYVSSKA LWTRMASSED NAGEKRNPVI IIQTDLMAAF QAHLEVYIQL LHDYTDLESK
DNWSAEYLDY RLTNDPARPM LKSLYGEEWT ERVLKTVLFP SP