Gene PHATRDRAFT_35165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_35165 
Symbol 
ID7200559 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp202299 
End bp203490 
Gene Length1192 bp 
Protein Length359 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179813 
Protein GI219118061 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.258874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGACA TCCGGGTTAT ACCATTGCCC TTTCCAAACT ACGATCGTGT TCCAGAGTAC 
GATCCAAAAA GTCCATCCGT CGTAGATTTA TGCGTGACTT TGATACCGAA TCAAACGTTT
CCGCGACCTA TCGGAACTCG CGCCAGTCGC GACAACATCG TTTCCCACAC TGGTGACGAT
ATTCACTTGG ATGGACCTCT TTCGGTCGCT GTGGCTGACC AAAACCCCGT CCCCGAATCG
TCAATACCGT CATGACGGAG TCGTCGACGC CATCCAGTAG GCGAGACGAA AGTCCAGGTC
CTGGATGGTT CACCGCGTAC TCCGTTCCAG CGACGCGGCC TGAGGAATCC GAGCTGCCCC
TACGAGTTCC GCGGCTCCGT CGCGTGCGTC CGCGTTCCGC AATGAACCAC GGCGGGTCGA
GCGATACCCT CGCCGATCCG TCGATCCAAC TCGGAGCGCC ACCGCGGTAC TACATGTTCC
AGGACTTTTT CCGAGACGGG CGTGACGCGG TCGAAGATGC GCCCGATGAT GGCGAGGATG
GGTACGGCCA AGAACCTCTA CCCAAGCGAC TCCGCTGGAT ACACACTCCC ACACAATGTA
CCGTGGAAAA GGACCAAGAC AGTGCGAGCG ACCTTACCGC GTCTTCTTCT TTTAATGAAG
CCTCCGAGGA TGACTTCAGC GAAGACGGAA TATCCAACGT CCATGCAACG AAGACGAGTT
CCGGAACTAG CAATCAAGAG TATACAGTGT CATTCTTTTC GTTTGGGGAC ACACCGCTCG
CTCACACCCA GGCGCTTCGT AACGGCAACA AGTCTCCTCC ACCGCTGCTA CTACCGTCAC
CAACCAGTAC AGCACAATCG AGCGTTCCCA ATCAAAAAGG GGGCATTGCT CCCAAGAAGC
GATTCATGGA TCGGTACAGG CAAGCTTCGT GGTCTACCCC CTACGCCGAA CAGCACGGTA
CGGACGTCAG GAGGTATTTA TAGATTCACC AGATTTCTCG GCTTTTGTGT TTGATGACAG
GAATTGATTG TTCCTGCTAG AAATTCGGAG CAACCGGAGG GCCTTCGAGG CGTGTCCCGC
GAAGTCGGCA CCGTGTTGGA TCGTCGGGCG GCGACCACGT TGGTGGAGGT GTCACTACAA
GTGGGAAATG GAAAATGGGG AGGATACCGG TTTGGTGGAT GCTCCGGGTT AG
 
Protein sequence
MEDIRVIPLP FPNYDRVPEY DPKSPSVVDL CVTLIPNQTF PRPIGTRASR DNIVSHTGDD 
IHLDGPLSVA VADQNPVPES SIPRRDESPG PGWFTAYSVP ATRPEESELP LRVPRLRRVR
PRSAMNHGGS SDTLADPSIQ LGAPPRYYMF QDFFRDGRDA VEDAPDDGED GYGQEPLPKR
LRWIHTPTQC TVEKDQDSAS DLTASSSFNE ASEDDFSEDG ISNVHATKTS SGTSNQEYTV
SFFSFGDTPL AHTQALRNGN KSPPPLLLPS PTSTAQSSVP NQKGGIAPKK RFMDRYRQAS
WSTPYAEQHE IRSNRRAFEA CPAKSAPCWI VGRRPRWWRC HYKWEMENGE DTGLVDAPG