Gene PHATRDRAFT_35092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_35092 
Symbol 
ID7200493 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp35987 
End bp37036 
Gene Length1050 bp 
Protein Length317 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179778 
Protein GI219117988 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.341983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCTG ACGGTGCTAA TGCGTTTCGT GGTGCGCTCG GGCGGATTGG ATGGTCTGTT 
CCTGCGGCGA ACGTGTTTAC GAACAAAGGT TTTGATGCGA TGGACTCCCT TGGCTTGGTT
ACTTGTGACC GTCTCAAGGA TATCTGCAAG ATCATTCGTC GCGGTACCGA TGGTGTGGCC
TCAGTGCCAG CTGCTGGTGG AAACGCTGCG GTGGCGGCGG CGCCTGGCAC CCCTGGGATA
GCGATCCCCA TGATGTGGGA GTACAAGCTA AGCGGAATGC ATCTCTGGGT GTCTGAGCGT
CTCCGACAGG GGACTCCGGT TGTTGCGGCG GACTTTACTG CGGCTATCGG AAACCTGTAC
ACCAGGAAGG TGCGTGAACT AGAAGAAGCG AAGGATGAGG AGGATGTTCA AGTCAAGCCT
CCGGCTCCGT TCTCGAAGGA AACGAAGTAG ATTCCGTTCT TCAAGTTGTT GGTCAACTAT
TTGAGCTCCG TGACGGGTGT TAACAAAGTG CCATTGGATT ATGTCGTCCG GAAAGATGAC
AACGTCGCTG CACCGGATAC CGAGTTCGAG ACGGAGCACG AGAAGTTGGT GCTGTTGACT
CCCCATACGG GGACGGCGTT CGACAAGGGC AACGGGAAAG TTTGGATCCA GGTGAAACAG
TTGACTGTAA ACGGTCCAGC GTGGACTTAT GTTGCGCCTT TCGAGAAGAA ACGCGACGGT
CGTGGAGCGG TCAAGGCTTT GAATAGTCAC TATGAAGCTG ATGCGGTGAT GTCCAAGTCC
AAGGCGGCTG CATTCGATGT GCTCGAGCAT ACCACCTACA CTGGCGAGCG TCGTAACTTT
GGGATGGAAA AGTACACAAA TGCTTTGTCA ATGGCGTTCC AGACTCTTGA CACGTACGGC
GAGACATTGA CGGAGTGTCC AGGAAGGAGG ATGTCTTCTT GCGCAATCAC CATTGCACAG
ATCCTAAGAT GCTCTCGGGA TGTCACGGTA TCCTACCTAA TGACATGTCT TGTGGACATA
CAATGTACAA GGATGGAGAT CCACGTGTGA
 
Protein sequence
MAADGANAFR GALGRIGWSV PAANVFTNKG FDAMDSLGLV TCDRLKDICK IIRRGTDGVA 
SVPAAGGNAA VAAAPGTPGI AIPMMWEYKL SGMHLWVSER LRQGTPVVAA DFTAAIGNLY
TRKLLVNYLS SVTGVNKVPL DYVVRKDDNV AAPDTEFETE HEKLVLLTPH TGTAFDKGNG
KVWIQVKQLT VNGPAWTYVA PFEKKRDGRG AVKALNSHYE ADAVMSKSKA AAFDVLEHTT
YTGERRNFGM EKYTNALSMA FQTLDTYGET LTECPGRRMS SCAITIAQIL RCSRDVTVSY
LMTCLVDIQC TRMEIHV