| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_27278 |
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| Symbol | Lhcx1 |
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| ID | 7200476 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011675 |
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| Strand | + |
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| Start bp | 996379 |
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| End bp | 997300 |
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| Gene Length | 922 bp |
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| Protein Length | 209 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | protein fucoxanthin chlorophyll a/c protein |
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| Protein accession | XP_002179760 |
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| Protein GI | 219117950 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AGGAGATTTT GATAAACACT TGAAAATAAC GATGAAGTTC GCTGCCACCA TCCTTGCTCT
TATCGGCTCT GCCGCTGCTT TCGCTCCGGC CCAAACAAGC CGTGCGTCTA CTAGCCTTCA
GTACGCGGTA AGGATGTCTC TAGTATCTTT GTTGAATCAT ATCCAGACCA TTGATCTTAC
ACGACCGTGG TCCTTCTTAC ATAAACCTGC AGAAAGAAGA TCTAGTTGGA GCCATTCCTC
CGGTCGGATT CTTCGACCCT CTTGGATTCG CTGACAAGGC CGATTCCCCC ACTTTGAAGC
GATACCGTGA AGCTGAGCTC ACCCACGGAC GTGTTGCCAT GCTTGCTGTC GTTGGATTCC
TTGTCGGCGA GGCGGTAGAA GGTTCGTCGT TCCTCTTCGA TGCTTCTATC TCTGGCCCGG
CCATCACCCA CCTTTCTCAA GTCCCGGCCC CCTTCTGGGT CCTCCTCACT ATTGCTATCG
GTGCTTCCGA ACAGACCCGT GCCGTGATCG GCTGGGTGGA TCCCGCCGAT GCCCCGGTTG
ACAAGCCCGG TCTTCTCCGT GACGACTACG TCCCGGGTGA CCTCGGATTC GACCCTCTCG
GCCTCAAGCC TTCTGACCCG GAAGAACTGA TCACTCTCCA GACGAAGGAA CTTCAGAACG
GACGTCTTGC TATGCTTGCC GCTGCCGGTT TCATGGCTCA GGAGCTTGTC AACGGGAAGG
GAATCCTTGA GAATCTTCAG GGTTAAAGAG TGCATCCATC CAAAACTGGA GGTATGGCTG
GTCACATGCA CAGAGTTAAC AACCAATCCC TTTTCAAGCG AAGCTCGCAT GGTCTGCCGC
AACAAAATTT AGTTGATGCC ACCACATAGA ACGCTGTAAC ATAGCCTAAA GCGCAGGTTT
TATAATCAAA ATGTATGGAA GC
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| Protein sequence | MKFAATILAL IGSAAAFAPA QTSRASTSLQ YAKEDLVGAI PPVGFFDPLG FADKADSPTL
KRYREAELTH GRVAMLAVVG FLVGEAVEGS SFLFDASISG PAITHLSQVP APFWVLLTIA
IGASEQTRAV IGWVDPADAP VDKPGLLRDD YVPGDLGFDP LGLKPSDPEE LITLQTKELQ
NGRLAMLAAA GFMAQELVNG KGILENLQG
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