Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_27240 |
Symbol | |
ID | 7200418 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 871029 |
End bp | 874455 |
Gene Length | 3427 bp |
Protein Length | 746 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179736 |
Protein GI | 219117900 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCCTCGATCT TTTCTGTTCC TCGGAAGTCA GCTCAACTTT CTGCCTGGGC AGCCAGTTTT TTGCGGCACT CGATTTCAGA CTTTCATCGT GAGGGTGAAA ATACCAAGAA TTGCCATTTC TTGTGTCACC ATCGTCTTTC CAATCCCTTG CTTCGGAATG TCATGCGCAG AAGCCAGTGT ATTGTCAGTA GCAACAAGAA AACTACTGGT ATAAAGACAC TGCTGCCGCG CTTCCAAGCC TTCTTGTGGT GTCTCGTCTT TTCATCTCGA TTTCTTTCGG CTGAAGGACT CGCCATCTTC ATGGGTCTCC TTAAAGTCGG CGTTCCCAAA TCCTGGGACG ATTCGAAGAA AGATCTCGAT TACATTCGCA AGGCTGGTGT TCGGCAATTC GTTTCTACCT ATAATCGTGT GAAGGACTTT AAAGGCGATG AACTCTTGTG GGGAGATGAA ATAGAGTACG GTATCTTTCA CATGGATCAC AATGCTAAGA AAGTGCGCTT GTCGTTGCGA GCCAAAGAAG TAAGTATTGA CGAATGTGGA CCGGAATTTT TCAGTGTGGC AGATCAACGA GCAAAGCTCT AATTCTTCCT TTGGCCTGCT GCACAGATCA TGGACGAACT GAATCGCAAA GAGACCCTTC ATTCCCAAAT CGTGGAAGGC TGCAACTGGG TACCAGAATA CGGAGCGTGG ATGGTGGAGG CCACACCCGA CCGTCCTTAC ACGGGTTACA CGACCGATCT ACTACGAGTC GAACGTAACA TGCGGCTCCG CCGCAAGCGT ATGCTCACGG TATTGTCGGA AGAGGAAGTG GCTCCAACGA TCAGCTCATT TTTCATGCTC GGCGCGCAAG GGGATGACGG GACGATCCCC TCTACAACCG TCGGCGGACC TGTCACCGAA AGTGAGTATA TCAGTGACGG GATAATTAAT CCTCACCCGC GTTTCGGAAC GCTGACGGCC AATATTCGCC AACGCCGCGG TTCCAAAGTC AACATACGAG TGCCGCTATT TCGGGATACC CGCACACCAG AATACATTGA TTTTGAGCCA CCCAAGGGCA GCGTCGATGG CTGCTGTGGT AGTGACAGCC AGCAGCTGTG GCGGTACGGC AAAGGAGATG TGTCTATGGA AAAGCACGGA ATGAACTACG TTATTGTGGG TTGCTCTAAA TCCTCCACGG ACGAAGAGTT TGATGATCAC GCGATAGATC AAGGTGCTAC CTTGCAAAAA TGGTTGGTTG ACGTAAATTG TGCGGGCTGC AAAGGTTTGT TTTATCGTCG TGCACCTAAC GAGATTGTGC CGGATTCGGA CTGGCCTCGC AATGGTGATA TTGTAGTTGG CTTGGAACTT CAGGAACCAG CTGGATGGGT GCGCTTGCAG AACGGCTACT ATCTACCCAT GCATAGTGAC GATGGGGAAG TAGCCTTTTT GCACAAGGTT TCCTCGCGAA CGCAGCCTTC CAATTCGGAG TTGAAGCGCA TCGGATCCAA TACACCCTTG TTTCGTGGGG CAGTTGAGAA AACGGATGTC TCATCTTTGT TGAACGGAAG GATTGAACTT TCACCCGAAT CCGCCACAGC CACCGCAACA TTAACCAAGG AAATTCCCGA AGAAATGCGA AGTGACGAAA CGTGCCGGGC TTCTATTCAT ATGGACGCGA TGGCCTTTGG GATGGGCTGC TGCTGTCTCC AAATTACTTT CCAGGCCAAG GATATTGAAG AAAGCCGATT CATATATGAT CAGCTTGCAG TTATGGCGCC CATTATGATG GCGCTGACGG CTTCGACTCC GATCCTGAAG GGTCGCTTGG CGGATACGGA TGCCCGGTGG GGCATCATCA GCGAAAGTGT CGATTGCAGG ACACTGGCGG AACGCGGCCG AGAGGATCCT GATGCTCCGT ACGAAGATTA CAATCGTAAG GGCCAGAGAC GAATTTACAA GAGCCGGTAC GATTCTATCA GCACCTACAT TTACCAGGGC GTTTTGTCGT TGAAGGACGA AAAAAGTACT GGGCTAGCCA ATCGTGTGTT GAATATTTAC AACGACATTC CGGTCCCTAT TGACGAAGAC AGCTATAAGC AACTTCGTGA TGCTGGTATT GATCCAGCGT TGGCGCAGCA CGTTGCACAT CTCTTTATTC GTGACCCACT CGTAGTCTTC AATGGCGCGG TCGAGGAGGT GGACGACGAT ACTCAGACCG AGCATTGGGA AAGCATTCAG AGTACCAATT GGTGAGTTGA CTTCCCGTGA TTTCAGAGGA ATATATGCAG TGAAATATCT TACACATCTC GCAACAGGCA AAGTGTCCGG TGGAAGCCTC CGCCGCCACG CAACAGTCCT AATGACCCCC ATATTGGCTG GCGTACCGAA TTTCGTAGTA TGGAATTGCA GTTGACGGAT TTTGAAAATG CTGCATTCAC GGCGTTTATT GTGCTCTTAA CCCGGGTTAT TTTGACGTTT GATCTGAACC TATACATTCC GATGAGCAGA GTTGATGCAA ATATGCAACG AGCGCATAGT AGGAATTCAG CTGCCAAGGG AAAGTTTTTC TTTCGGCGTC ACATGGCGCC CTTGCAGGAA GGTGATGATG GATATGGCGT CAAGTTTACT TCCATGTTCG CTCAAGCAAA GCGAGGAGAC GACCCTCTAA TGAGTCCTAT ACAGGACGTC AACGGTCATG TAGGCGTCGA AGAAGTGGAT GACGTCGTAA GTGACCAACG CCGCAAGTCC CCTTATGCTC CCGGAAGTTC TGAAGAAAAT TCGTTTGAAG AAATGACGAT GAACGAAATT ATGAATGGCA AGGGAGATCA CTTTCCTGGT CTGATTGTGC TGATTCTGGC GTATTTGGAT CACATCAACT GCGATAAGGT CACGCTCAAG CGCTTAGAAA ACTATCTGAC GTTTATTGCC AAGCGCGCAA CGGGTGAACT CGTCACACCT GCGACCTGGA TGAGGAATTT TGTCCGGAAT CATCCTGCAT ACGAACAAGA TTCGATTCTA TCAGATGAAA TCGCCTACGA CCTCATGATT GCCTGCCGTG ACATCGGCCA AGGGAAATTG CACGTTCCCG AATTATTGGG AGACAACATT ATTGATCCAA TTACAAGTGA AGGTGCTTAC GATGTCAAAC TTGACTCGAA GCGCGTCCAA AACGATCGCA TTCTTGATTT ATTGCGACAA TACACGAAGC GCAAATCCTT TTCGGCGCAT GGCGCGATGA ATGTCGGTGA CGCGTGAGAG ACAATTGTAT GATGATGTTG TGCGTCTTTT CTGTAGTGGG CTGATTTTTG AGTCCGATCA GTTTCACTAC ACTCCACCGC TATTATCGAA GAATTTTGGT TGCAGCGCAG TGGACCTAAA CTAGAATATG TTTTCAATTG TCATTTAACA CGCAATGCCA CTTAACTTCA ATTTTTCATT AAGCAGC
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Protein sequence | MRRSQCIVSS NKKTTGIKTL LPRFQAFLWC LVFSSRFLSA EGLAIFMGLL KVGVPKSWDD SKKDLDYIRK AGVRQFVSTY NRVKDFKGDE LLWGDEIEYG IFHMDHNAKK VRLSLRAKEI MDELNRKETL HSQIVEGCNW VPEYGAWMVE ATPDRPYTGY TTDLLRVERN MRLRRKRMLT VLSEEEVAPT ISSFFMLGAQ GDDGTIPSTT VGGPVTESEY ISDGIINPHP RFGTLTANIR QRRGSKVNIR VPLFRDTRTP EYIDFEPPKG SEIPEEMRSD ETCRASIHMD AMAFGMGCCC LQITFQAKDI EESRFIYDQL AVMAPIMMAL TASTPILKGR LADTDARWGI ISESVDCRTL AERGREDPDA PYEDYNRKGQ RRIYKSRYDS ISTYIYQGVL SLKDEKSTGL ANRVLNIYND IPVPIDEDSY KQLRDAGIDP ALAQHVAHLF IRDPLVVFNG AVEEVDDDTQ TEHWESIQST NWQSVRWKPP PPRNSPNDPH IGWRTEFRSM ELQLTDFENA AFTAFIVLLT RVILTFDLNL YIPMSRVDAN MQRAHSRNSA AKGKFFFRRH MAPLQEGDDG YGVNSEENSF EEMTMNEIMN GKGDHFPGLI VLILAYLDHI NCDKVTLKRL ENYLTFIAKR ATGELVTPAT WMRNFVRNHP AYEQDSILSD EIAYDLMIAC RDIGQGKLHV PELLGDNIID PITSEGAYDV KLDSKRVQND RILDLLRQYT KRKSFSAHGA MNVGDA
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