| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_27234 |
|---|
| Symbol | |
|---|
| ID | 7200442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011675 |
|---|
| Strand | + |
|---|
| Start bp | 831162 |
|---|
| End bp | 832556 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179726 |
|---|
| Protein GI | 219117879 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CATGCATCAG GTGTGCACTA ACGCAGTCTC GTGCTGTTCT CATGTCCTGT GTTCATACGA
AAGATAGAGC GATAGGTGTA TTTGTCATTT CGATTAGAAA TAATTGGCTT CGAGGCTGCA
GGATCCTCGA ACTTTTTCAC TTGTCTGCGA CTTTTTCAAA CTATGATAGG AGGTCGCGCC
AGCTTGAGGG GTACAGGTAG ATCGCCTTTC TATCGCGGTG GACAAAGCGG TCGTGGAAGA
GGCCGAGGAT GGGGAAGGGG TCGTGGAGTG CGGTATTTAA ATAGAGGAAG TTCTAGTCAG
CGCGACGGAG GTGGAAACGA CGACATTGAA GAAATTGGCA TTCCTACCGA CTCGAGCATT
TCTGTGGCTG TTGAAGGATG CTGCCATGGT GAGCTAGACA CAATTTACGA GCGATTGCAG
CAGCACGAAG CAAAGAGTGG CCGAAAGGTG GACCTTTTGA TATCCTGTGG GGATTTCCAG
TCACTACGGA ATTTAGCCGA TTTTCACAGT TTGGCCGTTC CCCCCAAATA CCGGGCTCTT
GGTTCCTTCT ACAAATACTA TTCGGGCGAG AAAACGGCAC CAATCTTGAC CATTTTTGTT
GGTGGTAACC ACGAGGCGTC ACAAGCCTTA CAGGAGCTTC CGTATGGAGG ATGGGTTGCT
CCCAACATAT ACTATTTGGC TACTTCTATT GTAAGATATC AGGGAATTCG CATTGGTGGA
ATCAGTGGTA TCCACAAAGC CCACGACTTT GCTGTTGGCA GATTCGAACG TCCACCATAC
GATCGCTCTT CTCTTCGAAG TGTATATCAT GTAAGGAACG TCGACATTTA CCGTATGAAA
TGCATATCCG ATTTGGATCC GATCGATATC ATTGTGAGTC ACGACTGGCC GCAAGGGATC
GAGCAATACG GTGACACCAA TAGTCTCCTT CGACGAAAGC CTTTCTTCCG TGAGGAAATC
GCGCAAAATT GTCTCGGGAG TCCCGGAAAT ATTGAGATCT TGCGTGCGTT GAAACCAAAA
TGGTGGTTTG CCGCCCATCT ACACGTAAAG TTTCATGCGA CTGTCAAACA TGGCGCTATC
AAAGCCGGAA ATGCTTCAAA AGATACCGTA ACCTCTCTTA TTCCGTCGCA GACCGTAGGA
TTGACAACTC AAGAGCCGGT GGAAGCCGAG AATGAAGAGG AATCTAAGAC TCGCTTTCTA
GGCTCTGAAT CAGTCGACCG TTGTAATACA AACGATTTGA CGGACCAAAT GACTCGCTTT
CTGTCTTTGG ACAAGTGCTT ACCAAGGCGG CATTATATGT CTATTTTGCA CTTACCAGTA
AAGGAGTGCA AAGACAATGC AAAGCTTGAG TACGATTTGG AATGGCTTGC TGTTGTTCGA
AAAACACACA GTTTG
|
|---|
| Protein sequence | MIGGRASLRG TGRSPFYRGG QSGRGRGRGW GRGRGVRYLN RGSSSQRDGG GNDDIEEIGI
PTDSSISVAV EGCCHGELDT IYERLQQHEA KSGRKVDLLI SCGDFQSLRN LADFHSLAVP
PKYRALGSFY KYYSGEKTAP ILTIFVGGNH EASQALQELP YGGWVAPNIY YLATSIVRYQ
GIRIGGISGI HKAHDFAVGR FERPPYDRSS LRSVYHVRNV DIYRMKCISD LDPIDIIVSH
DWPQGIEQYG DTNSLLRRKP FFREEIAQNC LGSPGNIEIL RALKPKWWFA AHLHTRFLGS
ESVDRCNTND LTDQMTRFLS LDKCLPRRHY MSILHLPVKE CKDNAKLEYD LEWLAVVRKT
HSL
|
|---|
| |