| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_27118 |
|---|
| Symbol | UBI3 |
|---|
| ID | 7200607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011675 |
|---|
| Strand | - |
|---|
| Start bp | 467666 |
|---|
| End bp | 468323 |
|---|
| Gene Length | 658 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | ubiquitin extension protein 3 |
|---|
| Protein accession | XP_002179851 |
|---|
| Protein GI | 219118140 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCGAACCAAC ACCGCAAACA CTATTGTCTA GTTCTTCCTA GGCGTACAAC GATCGCCCCC
CCCCCCCCCA TTCGTGTTCT TTTGGCTAGT AGCAATAGTA GTACTTGCGA CCAAGCAGTG
ATCACATACA CACGCACAAA CACATTCATC ATGCAAATTT TCGTCAAAAC TCTGACGGGA
AAGACCATCA CCCTTGATGT CGAACCCAGT GATACGATCG ACAACGTCAA AACTAAGATC
CAGGACAAGG AAGGCATTCC TCCGGATCAG CAACGATTGA TCTTTGCTGG CAAGCAACTG
GAAGATGGCC GTACACTGTC GGACTACAAC ATTCAGAAAG AATCCACCCT TCATTTGGTG
CTTCGTCTAC GTGGAGGAGG TAAGAAACGT AAAAAGAAGG TCTACACCAA GCCCAAGAAG
GTCAAGCGCG TCAATAAGAC CATTCCGTTG CAAACTCTCA AGTATTACCG GGTGGAATCG
GACGGCAAGG TCACTCGCCT CCGAAAGTAC AGCCCCGTCG CTGGCATTGG ATGCTTCATG
GCACAACACG TTGATCGTTA CTACTGTGGA AAGTCGGGAA CCACCTTCAT GTACGATGAT
ATGAAGGAAA GCGAGTAAAA GCCATGTAAC GGGTCTTTAA TCTAGCACTT CTACAAAC
|
|---|
| Protein sequence | MQIFVKTLTG KTITLDVEPS DTIDNVKTKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN
IQKESTLHLV LRLRGGGKKR KKKVYTKPKK VKRVNKTIPL QTLKYYRVES DGKVTRLRKY
SPVAGIGCFM AQHVDRYYCG KSGTTFMYDD MKESE
|
|---|
| |