Gene PHATRDRAFT_27039 details

Gene Information

• Locus tag: PHATRDRAFT_27039
• ID: 7200690
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: -
• Start bp: 203734
• End bp: 205874
• Gene Length: 2141 bp
• Protein Length: 634 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002179814
• Protein GI: 219118063

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.384955
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCGAATAAGT GTCCTACTTG AGCGAGACCT GCTACTGTGG CAAGATGTTA CAGTACGACG 
ATAACGGATT TTATTTCTTC GCGCTGAGTA CGCTCAGCTT TTACTTGGTA CCTTGTACGT 
TCGAATGGGT ACATCGGTTG GTCGCGGTCG ATGTCCGCCA TTCGTCACTC ACGTAGGTCA 
CCCGTTCCTT GTCTTTTCTC TCTCTCTCTT TCTCGCTCTC CCACAGCCTG GTATTCCATT 
CTACAAAAAG TGTTCAACGC CTTTTGGGTC AACGATGAAA AGATTGGTGC CGTCGCGCGG 
ACTTCCGCCG AACAGAAAAA GGCCGATCAG CTCAAAAAGT CGCAAAAGGG CATGAGCGTC 
CTGCATTCCC AAGGCTTCCT CATCAACGTC GGTATTACCC TCGCGCTCAG TATGCTCTTC 
GTGTGGCTCT TGTTTATGGT ATCGCAGGAC GGCGAAGTCA ACTCGTTCGA TCCCTTCTCC 
ATTCTCGAAA TTGATCACGG CTCGGACTCG AAATCGATCA AAAAGGCGTA CCGCAACCTC 
TCGCTCAAAT ACCATCCCGA TAAGAATCCC GGTAACCGCG CGGCGGAAGC CAAATTCATG 
ATGGTCAGTA AGGCCTACGA AACATTGACG GACGAAACGG CCAAGGAAAA TTACGAAAAG 
TACGGCAACC CGGACGGCAA ACAGAGTTTG GAAGTGTCCA TTGGATTGCC GTCGTTCTTG 
CTCGACACCA ACAACCGTAA TCTAGTCCTT ATGGTGTACC TTGTCATCAT GGTGGGGGTC 
ATTCCCTTTT GCGTTTGGAC CTACTACAGT GATTCCTCCA AGTACGGAGA AAAGGATGTC 
ATGTACGATA CCTATTCGTG GTTCCATCAC ACTCTCAACG AACACACGGT CGTCCGAGCC 
CTCCCGGAAG TCCTCGCGGG TTCCGCCGAA TTCCGCAAAC GCAACATTCC CCGTGACGCG 
GACGATAAAA AGGCCGTTTC CGCCGCCGTG ACCAACGTCA AATCGCTCAT GCCTAAACCC 
AAGTACAATC ATCCCGTCTG CGTCAAGGGC AACGTACTCA TGCATTCCCA TCTTTTGCGC 
CAAGACGTCG CCAAAGTGCA CGAAGAAGAT TTAAAGTACA TGCTGCGCTA CTCCACTGCA 
CTGATTGATG CCATGATTTC CGTCTGTAAG CATCAAGACT CAATTCAGAC GGCGGCTAAT 
TGTATTGAAT TCGGACAGTA CGTGACCCAG GCCATGTGGA CCAAGGATTC GCCGTTGTTG 
CAGCTACCGC ACTTTACGCC GGCAGAAGTA GCACACGTGG ATAAAGGCAA GGTCAAGATT 
GGAACGGTCC AAGAATATCG CGCGCAGGCG GAAGACCAGC GCAAAGGCAT GGCCACATTT 
TCCGACTTGC AGAAGAAGGA TATCGCCAAC TATCTCCACA TTTTCCCGGA TATCACGGTT 
GAATCCAAAG TTTTTGTGGA CGACGACGAA GATGACAACG TGTACGAAGG GGATTTGGTA 
ACCATTATGG TTACAATAAC TCGGAACAAT CTGGCAGACG GTGAAAAGGC GGGTCTCGTG 
CACGCACCCC GATTTCCCTT TCCCAAGAAG GAAGCTTGGT GGATTATTTT GGGGCAACTT 
AAGGAGGGCA AGATCATTTC GATTGATAAG GTTGGTAATT CCAACAAGAA GGTGCAACAC 
GCCATCAAGT TCTTGGCACC GCCGCAGGGT ACGTACGAAT TCGATCTACT TATCAAATCG 
AACGGATACG TGGGTGTCGA CCAAAAATTG AAAGTAGACA TGACCACATT GGACAACTCG 
GCCTTACCGG AATACAAGGT GCATCCGGAT GATGCCGAGC TGGACGATGA GCCGACACTG 
TTCGAGGAGA TGCTGAACGC CCACATTGAG CAGGATTCGG ATGATGATGA TTCGGACGAG 
GAAGATTCCG ATGACGAAGA TCAGCCACAA ACAGAAGCCG CCAAGAAAAA GGAGCAATTG 
CGAAAGGCAC GGCAAGCTGA CAAAGATGAC GACGACGATG ATTCGGATGA CGAAGCGGAA 
GAGGTGTACG CCGATAAGTA GACTCCTCCG GCGTTACACT TCCTATTTCG GCCCGATACA 
TTTCTAACTA TTAAGAACTT ATAGGTTGGA TTTACATATA C 

 

Protein sequence

MLQYDDNGFY FFALSTLSFY LVPSWYSILQ KVFNAFWVND EKIGAVARTS AEQKKADQLK 
KSQKGMSVLH SQGFLINVGI TLALSMLFVW LLFMVSQDGE VNSFDPFSIL EIDHGSDSKS 
IKKAYRNLSL KYHPDKNPGN RAAEAKFMMV SKAYETLTDE TAKENYEKYG NPDGKQSLEV 
SIGLPSFLLD TNNRNLVLMV YLVIMVGVIP FCVWTYYSDS SKYGEKDVMY DTYSWFHHTL 
NEHTVVRALP EVLAGSAEFR KRNIPRDADD KKAVSAAVTN VKSLMPKPKY NHPVCVKGNV 
LMHSHLLRQD VAKVHEEDLK YMLRYSTALI DAMISVCKHQ DSIQTAANCI EFGQYVTQAM 
WTKDSPLLQL PHFTPAEVAH VDKGKVKIGT VQEYRAQAED QRKGMATFSD LQKKDIANYL 
HIFPDITVES KVFVDDDEDD NVYEGDLVTI MVTITRNNLA DGEKAGLVHA PRFPFPKKEA 
WWIILGQLKE GKIISIDKVG NSNKKVQHAI KFLAPPQGTY EFDLLIKSNG YVGVDQKLKV 
DMTTLDNSAL PEYKVHPDDA ELDDEPTLFE EMLNAHIEQD SDDDDSDEED SDDEDQPQTE 
AAKKKEQLRK ARQADKDDDD DDSDDEAEEV YADK