Gene PHATRDRAFT_20135 details

Gene Information

• Locus tag: PHATRDRAFT_20135
• ID: 7200463
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: -
• Start bp: 924656
• End bp: 926786
• Gene Length: 2131 bp
• Protein Length: 690 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002179940
• Protein GI: 219118326

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTGAACACC GGAGCACAAT CTAAACTGAC AGTGCGTAAT CGTCACCACA ACGCGGTAAT 
GTCCAGGCAA GCTTCCCAAG TTAAGAATCG GGCTCCGGCA CCGATTCAAA TTTCGGCCGA 
ACAAATTTTA CGCGAAGCCG CCGACCGCCA ACAAGCGCAC GAAATCGAGC CGATCGTGAA 
AATCCATGAC GCCGAGGAAT ACCAGGCTCA TTTACGCGAT CGAAGGAAGC ACTACGAGGA 
TAATATTCGT TACCGACGGG AAGATGTAGG GAATTGGGTC AAGTACGCAC GATTTGAGGA 
AGAAAATAAA GAATTTGAAC GGGCACGGTC CGTTTACGAA CGATCTCTCG AAGTGGACCA 
TCGCTCGGCG CAATTATGGT TGCGGTACGC CGAGTTTGAG ATGCGGCAAG AATTTATCAA 
TCACGCACGG AATGTGTTGG ACCGGGCCGT CCAGATCTTG CCCCGTGTCG ACTTTTTGTG 
GTACAAATAC GTATACATGG AAGAAATGGT CGGGGATCTG CCCAAAACAA GAGCTGTTTT 
CGAGCGATGG ATGGAATGGA TGCCTGATGA CAACGGTTGG TTGAGTTACG CTCGCTTTGA 
AACACGTTGT GGAAATGTAA CACAAGCCGA CAGCATCATG CGGAGATATG TAAATACATA 
TCCGTCCGCG AGGGCATTTC TGCGATTCGC CAAGTGGGCC GAGTTTGAGG CCAAGGACGT 
TGCCTTGGCA CGCACCATTT TCGAATCCGC CTTATCCGAA TTGGAGCCCG AAGAATCTCG 
GCAAGCTCGA GTTTTCAAAC AATTTGCGTC TTTTGAAGAG CGACAGAGGG AATACGATCG 
AGCAAGAGTC ATTTACAAGC ACGCCCTTTC CTTACTCCAC CTTGGCGAGA CACCGTCGTT 
AGCTGATGAG GAAGACTTGA CTAACGCCGA GCGCACCAAG CGAGAGGAAC TGTACAAAGC 
CTACATCACG TTTGAAAAGA AACACGGAGA TCGCCAAGGA ATTGAAGACG TCATTGTTAC 
GAAGCAACGC GCGCAATATA GGGAGCGGGC AGCGGAACAT CCCTTTGACT ACGACTGCTG 
GTTCGAATGG GCCAAACTGG AAGAAGAACA CGGTAGCGTT TCGGCAGTTC GCGAAACTTA 
CGAAAAAGCC GTGGCAAATG TACCACCTTC GGAACAGAAA GATCATTGGC GGCGGTACAT 
CTATCTATGG ATATATTATG CTGTATATGA AGAACTTGTG AATGCCGACT TAGATAGGGC 
CTTCCAAGTT TACGAAACCT GCTTGAGCAT CATACCCCAC AAGAAATTCA GTTTTGCCAA 
AATATGGATA CAAGCAGCCA AGTTATTGAT TCGACGTCGG GAGCTTACGG CTGCGAGAAG 
ACTCTTGGGT AGAGCGATCG GACAGTGTGG TAAGGAGCGC ATTTTCATTG AGTACGTTGC 
ACTTGAGCTA GCGCTGGGTG AAGTTGATCG ATGCCGCAAT CTATATAGCA ACTATCTCAA 
GGCAATGCCA CACAATTGCA AAGCATGGTT CAAGTATGCT GATCTGGAAA AGTCGGTTGG 
CGAAACAGAA CGTTGCAGGG CTATTTTCGA ATTGGCTATT GCACAACCCG CTTTGGACAT 
GCCGGAAATG CTCTGGAAAG GGTATATAGA TTTTGAAATC GAAGAAAATG AAGGGGAGAA 
TGCTCGAAAG CTATATGAAC GGCTGTTGGA GCGAACAAGT CACGTGAAAG TCTGGATATC 
GTACGCACAA TTCGAAGGTA CCGACATTGG CAAGGGGTTG GAAGGAGCTC GCGCAGTGTT 
CGAGCAAGCC TACGATCACC TCAAAGCCCA AGGGCTCAGT GAAGAACGAG TGTTGCTGTT 
GGATGCTTGG CGAGTATTTG AGAAGAGCAA TGGTAGCCAA AAAGACGTGG CAGATGTGGA 
GGCCAAGATG CCGCGGAGAA TCAAGAGAAA GCGTATGCGC GAAGACGAAA GCGGCAAAGA 
TCTTGGCTGG GAAGAATATT TCGACTATCA GTTTCCAGAC GATGAAGGCG GCGCTTCCAA 
CAACTTCAAA ATTTTGGAGA TGGCTGCAAA GTGGAAGCAG CAAAGGGCCG AAGCAAGCGA 
TGATGATTCG GATCTTGACA GTAATGAATA A 

 

Protein sequence

MSRQASQVKN RAPAPIQISA EQILREAADR QQAHEIEPIV KIHDAEEYQA HLRDRRKHYE 
DNIRYRREDV GNWVKYARFE EENKEFERAR SVYERSLEVD HRSAQLWLRY AEFEMRQEFI 
NHARNVLDRA VQILPRVDFL WYKYVYMEEM VGDLPKTRAV FERWMEWMPD DNGWLSYARF 
ETRCGNVTQA DSIMRRYVNT YPSARAFLRF AKWAEFEAKD VALARTIFES ALSELEPEES 
RQARVFKQFA SFEERQREYD RARVIYKHAL SLLHLGETPS LADEEDLTNA ERTKREELYK 
AYITFEKKHG DRQGIEDVIV TKQRAQYRER AAEHPFDYDC WFEWAKLEEE HGSVSAVRET 
YEKAVANVPP SEQKDHWRRY IYLWIYYAVY EELVNADLDR AFQVYETCLS IIPHKKFSFA 
KIWIQAAKLL IRRRELTAAR RLLGRAIGQC GKERIFIEYV ALELALGEVD RCRNLYSNYL 
KAMPHNCKAW FKYADLEKSV GETERCRAIF ELAIAQPALD MPEMLWKGYI DFEIEENEGE 
NARKLYERLL ERTSHVKVWI SYAQFEGTDI GKGLEGARAV FEQAYDHLKA QGLSEERVLL 
LDAWRVFEKS NGSQKDVADV EAKMPRRIKR KRMREDESGK DLGWEEYFDY QFPDDEGGAS 
NNFKILEMAA KWKQQRAEAS DDDSDLDSNE