| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_20026 |
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| Symbol | |
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| ID | 7200629 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011675 |
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| Strand | - |
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| Start bp | 563365 |
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| End bp | 565988 |
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| Gene Length | 2624 bp |
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| Protein Length | 646 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179870 |
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| Protein GI | 219118180 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GCTACACTAG AAGATCTTTT GACAACTATC TATCCAGACT TGCACTTGAT TTGTATCGCG
TTTGTTTTTT TACTCGCTGC CGCTTCTGCG CAAATTTGTA TTCCACGCTA TTTGGGCCGT
ATATTGGATG CCTTGGCTGC AGCTTTTCCA AACGCAGATG ACAATGACTC GCGGCACGAA
TCCATGTGGG AAGTCCCGAA TTTTATCAAG TACGTCAAAC TGCTTGTGCT TGCGTCGGTT
TTGGCAGGAG TGTTTTCTGG TCTACGGGGC TCTGTATTTA CTGTGGTAGG CGGACGAGTG
AATGTGAGAC TGCGAATCCA GTTGATGGAC TCGTTGCTTT CTCAAGATAT AGGCTTTTTT
GATACTACCA AGACTGGTGA CATAACTAGC CGGTTGAGCA GTGACACAAC TCTAGTTGGC
GATCAAGTGA CTCTGAATGT AAACGTATTT TTGAGATCGC TTGTTCAAGG TATGTGCCAC
CAATACTATC GTTTCTGTTT TTAAAAGACT GTCGACCTGA AATCCATACA TTTCTCGTTT
CCAGCTTTCG GGGTATTGCT TTGCATGTTT CTTATTTCCT GGCAGCTGTC TATACTTGCA
TTTATTTCGG TGCCGTTGAT TACTATTCTT TCCAAATGGT ATGGCAACTA CGTTCGATCA
TTGACAAAGC TGATGCAGAA GAAACTTGCG GACGGAAATA GCGTCAGCGA GGCTGCCTTT
GGATCGATGC CCACCGTACG GTCATTCGAT GCTGCTGAAG CTGAACTAAA GGAATTTGAG
CAGCACATGG GCAAGTATCT TGCTTTGAAC AAGCGATCAG CAGTGGCTTA CTGTGGGTAT
GCGGCATTTA CTACGGCTGT CCCGCAGTTG GTATTTGCGG TTGTTGGTAT GTCAGATAGA
ATGCCCGTAT ATGTTTACAT CTCATTAAAA TCTGTTCTCA CTCATAGAAT GTCTACTTCA
CACAAAGTTT TTTATGGAGG AATGCTTGTA CGAAATAACG ATATATCGAT TGGTGATCTT
GTTAAGTTCT TGCTCTATTT ACAAGCTCTA TCGGATGCTT TTTCAAGTAT CGGATACATT
TTCAGTTCGC TTACCCAGGC AGTTGGTGCC GCCGATAAAG TCTTCGAGCT TCTGCATAGA
ACGCCCCGAT ACCGCGAGTC CTCCGCACAA CGCGAGGCTG TGCGGGACCG TAATATGTAC
CGCGGCATGC TCGGGATTGA AGCGGTCAAA ACTCGCATGC AGCGTACAAA GGGTATTCGA
CTCAGTAAGC CTCGTGGAGA AATCCAGTTT GAAAATGTGG ACCTGTACTA CCCAGCACGA
CCCCAGCGTC AAGTTCTGAA TAAGCTCTCG CTTAAAGTTG AGCCAGGTTC CATTATCGCG
TTGGTTGGTC AGAGTGGTGG CGGTAAAAGC AGCGTCATGT CACTGATTCA ACATCTGTAT
GAGCAAAGCG GAGGAAGAGT CCTTTTGGAC GGTCAAGACG TTCACGAAAT AAGTCCGGAA
TGCTTGAGTA GAACAATTTC GATTGTTTCT CAAGAACCTA CTTTGTTTGC CCGAAGTATT
AAAAGAAATA TCATGTACGG CCTCGAAGGA ACGGACATGG AACCAACGCA CGAAGAGATC
GTCGAAGCAG CGAGACTGGC CAATGCAGAG TCTTTTATTG AAACACTGCC CCAAAAGTGA
GTAGAACATA AACAATCGCT ATCGGATGAC AGCCACAAAT TTGCTATCTG TGCTGACATT
ATCTTCAATT AAGGTACGAC ACGGAGGTCG GAGAACGTGG TGTGCAGTTG AGTGGGGGCC
AACGTCAACG GCTTGCAATC GCACGCGCCC TCGTAAGAAA ACCAAAAGTG TTGCTATTGG
ATGAAGCAAC CTCTGCCCTT GATGCAGAAA GCGAACATTT GGTACAGAGC GCAATTGACG
ATATGCTCGC AAGAGGGAAA AACGAAAAGG GGGAGGGCGC AATGACTGTC CTTATTGTCG
CTCACAGATT ATCAACCGTA CGAAATGCGG ATACTATTTT TGTTATTCAG AACGGCCAGG
TCGTGGAAGA AGGCAATCAT GGTCAGCTTT TGGAAAACCC AACTGGTGCG TACAGCTCAT
TGATTCGGCG ACAAATGCAG GCACAGGAAA AGCTAGATAT CGCAAAGACC CCGGCCGATC
CCAATAACAA GAGTGCCTCG AGACCTGTCA ACCCTTCCGT GAAACACTTG AACAGGAAGC
TCGCTCCGAA GCATGATGGC GTATCAAGCC AGCGATTGCC GACTAGATCT CCAACGGCGC
TGAAGACAAA TTTGGTGACG GACGAAACTC TAAGTCGACA GCCTGCAAAC ACTCCATCAC
GTAAGGGTTC GTCAGTCTCA TCGGCCAGAA TCACGCGTCC AAAATCGAAA AATCCAAAAG
GTGCAAACAC GGAATCTTCA CGGAAAAATG TCAATGGTTC TTCGTGAGAG GAGAGCAAGA
GCTAAGCCCC AAGCAACATG GTCGACTCTG TAGGCGAATT GAGGCACTCT GGCTGGCAGT
TTGGAGGTGG AAAGGTTGGG TCCATTTTGT TTCCCCAATC ATGAAATACG TAGCTGTATA
TAAGAAATAC CTGCATGAGC GTGTAGTACA AAGGGAGCAA TGTC
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| Protein sequence | MWEVPNFIKY VKLLVLASVL AGVFSGLRGS VFTVVGGRVN VRLRIQLMDS LLSQDIGFFD
TTKTGDITSR LSSDTTLVGD QVTLNVNVFL RSLVQAFGVL LCMFLISWQL SILAFISVPL
ITILSKWYGN YVRSLTKLMQ KKLADGNSVS EAAFGSMPTV RSFDAAEAEL KEFEQHMGKY
LALNKRSAVA YCGYAAFTTA VPQLVFAVVV FYGGMLVRNN DISIGDLVKF LLYLQALSDA
FSSIGYIFSS LTQAVGAADK VFELLHRTPR YRESSAQREA PRGEIQFENV DLYYPARPQR
QVLNKLSLKV EPGSIIALVG QSGGGKSSVM SLIQHLYEQS GGRVLLDGQD VHEISPECLS
RTISIVSQEP TLFARSIKRN IMYGLEGTDM EPTHEEIVEA ARLANAESFI ETLPQKYDTE
VGERGVQLSG GQRQRLAIAR ALVRKPKVLL LDEATSALDA ESEHLVQSAI DDMLARGKNE
KGEGAMTVLI VAHRLSTVRN ADTIFVIQNG QVVEEGNHGQ LLENPTGAYS SLIRRQMQAQ
EKLDIAKTPA DPNNKSASRP VNPSVKHLNR KLAPKHDGVS SQRLPTRSPT ALKTNLVTDE
TLSRQPANTP SRKGSSVSSA RITRPKSKNP KGANTESSRK NVNGSS
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