Gene PHATRDRAFT_20007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_20007 
Symbol 
ID7200615 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp499394 
End bp500510 
Gene Length1117 bp 
Protein Length283 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179855 
Protein GI219118149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGCCGTCAAA TTCGTAAAGC AGTCGTCTCA AGCTTGTCTA GTATGGCTTT CTTTGGACCA 
GAATCTGCAA TCGGCAGCGA TATTCTGGAT ATTGGATCGC GCAAGGCTCT GACAAAGCGA
CAGCGCGGTA TCGGGGTCGA CCTTGGCGTC CCGGGACAGT TTGACGTGCC CAATGTTCCT
GATGTACGTC TTCCTGTTCG TTCCGCTAGC ATGTACTTGA CTCAATATGG GTATATCTGT
CTGACCTATA ACCAACCTCA TACTTCATTC TGTACTCTTT AGCCCGCTTT ATACTGTCGC
AGCAACTTCG CCTCCGCCTG CGGTAATGCC GACGCTGGAC AAGAAGTGAA GTTTGCCAAA
GGAACGACAA CCCTTGCTTT CAAGTTCAAT GGTGGAATCA TTGTCAGCGT CGATTCGCGC
TCCACAATGG GTTACTACAT TGCGTCCGGA ACAGTCAAGA AGGTCATCGA AATCAATCCA
TTTTTGCTCG GAACCATGGC TGGAGGCGCT GCAGATTGTT CCTTTTGGGA GCGAAACCTG
GGAATGGAAT GTCGTCTGTA CGAGCTCCGC AACGGCCGTC GCATTACTGT GGCGGCAGCC
TCCAAGCTAT TGGCCAACGT CATGAGCGCT TACCGCGGCT ACGGTCTCTC CATGGGAACT
ATGATTACTG GCTGGGACGA AACCGGCCCT CAGCTGTACT ACGTTGACAA CGACGGCACC
CGCCTCAAGG GCAAATACTT TTCGGTAGGC AGTGGTTCGA TGTACGCCTA CGGTGTTCTG
GACAACCACT GGCGTGAAGA TCTATCGGTG GAAGAGGCCA TTGACCTTGG CAAGCGCGCT
ATATATCACG CCACTCACCG AGATGCCGCT TCGGGTGGTA TCAATAACCT GGTACGTTTT
TTCTTTCCTT GTGTATGCGG GATTTGTTTT GCTCAATCAC CTTTATGCTC ACGTTGTTTG
CTTATGTCGC CCCTTGCTTT CGGTAGTATC ACGTGACCGC CGACGGATGG AAGTACATTC
ATGGAATTGA CGTCAACGAT ATGCACTACG AGTTTGCCGA GGAAAAGAAG AATGCCATGT
CTTCTTAAAG AAACACACGT AGACAGAATT TACTATT
 
Protein sequence
MAFFGPESAI GSDILDIGSR KALTKRQRGI GVDLGVPGQF DVPNVPDPAL YCRSNFASAC 
GNADAGQEVK FAKGTTTLAF KFNGGIIVSV DSRSTMGYYI ASGTVKKVIE INPFLLGTMA
GGAADCSFWE RNLGMECRLY ELRNGRRITV AAASKLLANV MSAYRGYGLS MGTMITGWDE
TGPQLYYVDN DGTRLKGKYF SVGSGSMYAY GVLDNHWRED LSVEEAIDLG KRAIYHATHR
DAASGGINNL YHVTADGWKY IHGIDVNDMH YEFAEEKKNA MSS