Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_20007 |
Symbol | |
ID | 7200615 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 499394 |
End bp | 500510 |
Gene Length | 1117 bp |
Protein Length | 283 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179855 |
Protein GI | 219118149 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TGCCGTCAAA TTCGTAAAGC AGTCGTCTCA AGCTTGTCTA GTATGGCTTT CTTTGGACCA GAATCTGCAA TCGGCAGCGA TATTCTGGAT ATTGGATCGC GCAAGGCTCT GACAAAGCGA CAGCGCGGTA TCGGGGTCGA CCTTGGCGTC CCGGGACAGT TTGACGTGCC CAATGTTCCT GATGTACGTC TTCCTGTTCG TTCCGCTAGC ATGTACTTGA CTCAATATGG GTATATCTGT CTGACCTATA ACCAACCTCA TACTTCATTC TGTACTCTTT AGCCCGCTTT ATACTGTCGC AGCAACTTCG CCTCCGCCTG CGGTAATGCC GACGCTGGAC AAGAAGTGAA GTTTGCCAAA GGAACGACAA CCCTTGCTTT CAAGTTCAAT GGTGGAATCA TTGTCAGCGT CGATTCGCGC TCCACAATGG GTTACTACAT TGCGTCCGGA ACAGTCAAGA AGGTCATCGA AATCAATCCA TTTTTGCTCG GAACCATGGC TGGAGGCGCT GCAGATTGTT CCTTTTGGGA GCGAAACCTG GGAATGGAAT GTCGTCTGTA CGAGCTCCGC AACGGCCGTC GCATTACTGT GGCGGCAGCC TCCAAGCTAT TGGCCAACGT CATGAGCGCT TACCGCGGCT ACGGTCTCTC CATGGGAACT ATGATTACTG GCTGGGACGA AACCGGCCCT CAGCTGTACT ACGTTGACAA CGACGGCACC CGCCTCAAGG GCAAATACTT TTCGGTAGGC AGTGGTTCGA TGTACGCCTA CGGTGTTCTG GACAACCACT GGCGTGAAGA TCTATCGGTG GAAGAGGCCA TTGACCTTGG CAAGCGCGCT ATATATCACG CCACTCACCG AGATGCCGCT TCGGGTGGTA TCAATAACCT GGTACGTTTT TTCTTTCCTT GTGTATGCGG GATTTGTTTT GCTCAATCAC CTTTATGCTC ACGTTGTTTG CTTATGTCGC CCCTTGCTTT CGGTAGTATC ACGTGACCGC CGACGGATGG AAGTACATTC ATGGAATTGA CGTCAACGAT ATGCACTACG AGTTTGCCGA GGAAAAGAAG AATGCCATGT CTTCTTAAAG AAACACACGT AGACAGAATT TACTATT
|
Protein sequence | MAFFGPESAI GSDILDIGSR KALTKRQRGI GVDLGVPGQF DVPNVPDPAL YCRSNFASAC GNADAGQEVK FAKGTTTLAF KFNGGIIVSV DSRSTMGYYI ASGTVKKVIE INPFLLGTMA GGAADCSFWE RNLGMECRLY ELRNGRRITV AAASKLLANV MSAYRGYGLS MGTMITGWDE TGPQLYYVDN DGTRLKGKYF SVGSGSMYAY GVLDNHWRED LSVEEAIDLG KRAIYHATHR DAASGGINNL YHVTADGWKY IHGIDVNDMH YEFAEEKKNA MSS
|
| |