Gene PHATRDRAFT_19982 details

Gene Information

• Locus tag: PHATRDRAFT_19982
• ID: 7200601
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 441092
• End bp: 448312
• Gene Length: 7221 bp
• Protein Length: 2347 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002179646
• Protein GI: 219117712

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAAGAAA AGGCCCGACG ATGGGCACAA ATGCAACGCA AACGCTACGC TCACAAACGG 
CTCAACACAT TCACAGCGCC GCAGAAGGAA ACCCTCCCGC CTGATTTCTT GCGCAAAATC 
TTGCAGGACC ATGGGGACAT GAGCAGCAAA CGCTACCAGT CGGAAAAACG TATCTACCTA 
GGAGCCTTAA AATACGTTCC CCACGCTTTG TATAAACTTC TCGAAAATAT TCCCATGCCG 
TGGGAGTCTT ATAAAGAAGT ACCCGTGCTC TTCCACGTCA CGGGAGCGAT TTCTTTCATC 
GATCACGTAC CGACCGTCAT CGAGCCGGTG TACCGGGCGC AGTGGGGAAC TGCCTGGTTG 
TTGATGCGCA GAGAAAAACG GGATCGCCGA CATTTCAAGC GGATGCGATT TCCTCCCTTT 
GACGATGAGG AACCGCCGCT CGACTACGCC GATCATTTAC TTACGGTAGA GCCCGGGGAA 
GCCGTACAAC TGGATTTGCA ACAAGATGAC GATTACGCCT TGTTAAGAGA TTGGTTCTAC 
GAGTCCTCAC AGCCTCTAAG TGATATTCGG GAAACGCGAC AAGAGCCGCT GGCGGATCAC 
GTCTACGTAA ACGGTCCGAG TTATAAGACA TGGCGCTTGA GCACACCAGT GTTGGCCCAA 
CTGTACCGTC TCGCGGAACC CCTACTGAAT TCCCAGACCG ATACGAATCA TCGGTATTTG 
TTCGATTTGC CCCACTTTTT GACGGCCAAG GCATTGAATG TCGCCATTCC CGGTGGGCCC 
CGTTTCGAAC CGCTATTTCG AGATGTGGAG CAAGATGAAG ATTGGAACGA CTTCAATGAC 
GTTTCGAAAA TCATCATTCG GGTGCCGATA CGGACGGAAT ACAAGATCGC GTTTCCGCAC 
GTTTACAATG CACGGCCACG AAAAACCGTA TTGTCGCCTT ATCACGATGT GCCCTCGAGT 
TACGCGGGAG ACGAAGATGA CGATGAGCCG GATTTGCTTT GTTTTGAAGC CTACCCGTCT 
CAATTAAATC CGATCGTGCG CGTCGTCCAT ACCAAGGACT GGTCCGTACC GGAAGACGTG 
GATGAATTTG AAGTGGAAGA CTTTAGTTTG CCGTTGGTGG GGGAAACTGA GACTGGCGAT 
TGGGACAATA TTTGGGCACA GCATGACGCG TTCGCCGATT GGAACGATCC AGGTTGGGAA 
TTGGACGAAG AAGTCGTCGG GGCGCCCGAC TTGCAACCGC TGTTGTCGGA CGCCCCACTG 
GCTACAGAAA CAACCTCCTC TGGCGTTGCC CTGTACTGGG CACCATATCC GTTCAACACT 
CGTGCGGGAC GTACCCGTCG AGTCCTTGAC ATTCCCCTGA TCGGCCACTG GTTCCGGGAC 
CGAGTTTCGC GAGATATGAA CTATCCCACC AAAGTGCGCG TCTCTTACCA AAAGCTTCTC 
AAAGCCTGGG TGGTTTCGCA GCTGCACTCC CGTCCGGCTA AGCCACGCGC CAAGCGTTCA 
TTATTCAAGA GCCTTAAGAG TACCAAGTTC TTTCAGTGTA CCGAGCTGGA CTGGGTTGAG 
GTGGGCCTGC AGATCTGCCG TCAAGGCCAC AATGTCTTGA ACTTGTTGAT TCAACGCAAA 
CAGCTCAACT ACTTGCATTT GGACTACAAC TTTAACCTCA AACCGACAAA AACTCTGACG 
ACCAAGGAGC GTAAAAAGTC GCGCTTTGGT AACGCTTTTC ATTTAGTTCG AGAGATTTTG 
CGTCTAACAA AACTTGTGGT CGATGCTCAT GTGCAGTATC GTCTTTCTAA TATTGACGCT 
TACCAGCTCG CGGATGGACT CCAGTATACA TTTAACCACG TCGGTCAGCT GACGGGAATG 
TATCGGTACA AATACCGATT GATGCGGCAA ATTCGAACTT GCAAGGATCT GAAACACTTA 
ATCTATTATC GTTTCAATAC GGGCCCTGTC GGCAAAGGAC CAGGAGTTGG TTTTTGGGCG 
CCGTCCTGGC GTGTATGGAT GTTCTTCCTT CGTGGTATTA CACCGTTACT AGAAAAGTGG 
CTGGGTAATT TGCTGGCACG CCAGTTTGAG GGTCGTCATT CCAAATCATT TGCCAAGAAT 
GTGACGAAGC AACGGGTTGA ATCACACTTT GATTTGGAAT TGCGTGCGAG TGTGATGCAC 
GACATTCTCG ATATGATGCC TGCCGGTGTC AAACAAAATA AGAGTCGCGT TATTTTGTCA 
CATTTGTCTG AGGCATTCCG ATGCTGGAAA GCAAACATTC CTTGGAAGGT GCCCGGTATG 
CCTGCTCCTA TCGAGAACAT GATTTTACGT TATGTCAAGG CCAAGGCTGA TTGGTGGACA 
AATATTGCGC ATTACAATCG CGAACGCATC AAGCGAGGCG GAACTGTTGA TAAGAGTGTG 
GTCAAGAAGA ATTTAGGTCG ACTTACCAGG TTGTGGCTCA AGGCAGAGCA GGAACGCCAG 
CACAACTATC TCAAGGACGG ACCGTACGTT TCGGCCGAAG AAGCCGTCGC CATTTATACG 
ACGACTGTTC ATTGGTTGGA AAGTCGAAAG TTTACTCCAA TTCCCTTTCC ACCGCTATCC 
TACAAGCACG ATACCAAGCT GCTGATTCTG GCACTGGAAC GGTTAAAGGA AAATTACGGT 
TTAGCGATTC GTCTGAATAG TGCCGCGCGT GAAGAGTTGG CCTTGATCGA GCAAGCGTAC 
GATAATCCAC ATGAAGCTCT GTCGCGTATT AAGCGTCACC TACTAACGCA GCGAACTTTC 
AAGGAAGTGG AGGTTGAGTT TATGGACATG TACGAATTCT TGTCGCCAGT GTATACCATT 
GAGCCACTGG AGAAGATTAC GGACTCATAT TTGGACCAGT ATCTTTGGTA CGAAGCTGAC 
AAGCGCCACT TGTTCCCAAC CTGGATCAAG CCCGCGGACT CGGAGCCTCC GCCCTTACTT 
GTTTACAAAT GGTGTCAAGG AATCAATAAC TTGGAAAATA TTTGGCAGGT CGACGAGAAC 
GGCGATAGCG TTGTTCTGGT TCAATCGAAG TTTGACAAAC TTTACGAGAA AATGGACCTC 
ACTTTGTTGA ATCGACTGCT GCGACTCATC GTCGATCACA ATATTGCTGA TTACATGACA 
GCAAAGAACA ATGTCAGTAT CGCCTTCAAA GATATGCTAC ACACGAACTC CTATGGGTTA 
ATTCGTGGGT TACAGTTCTC ATCGTTTATC GTTCAGTATT ACGGGCTGGT ATTGGACCTT 
TTGGTGTTGG GTTTGACACG AGCCAGCGAA ATTGCGGGTC TTCCGCAGCG TCCCAATGAA 
TATTTGACTT TTGCGGACAT TGAGACGGAG GTCAGTCACC CTATTCGTCT TTATACCCGG 
TATTTTGACA AGATTTACAT GTTGTTCAAG TTCGACACAA ACGATAGTAA GGATCTTATC 
CAACGTTACC TTACTGAGCA TCCTGATCCA AACAACGAAA ATGCTGTCGG ATATAGAAAC 
AAGAAGTGCT GGCCTCGTGA TTGTCGCATG CGCTTACTGA AGCGCGATGT CAACCTCGGA 
CGAGCGGTGT TTTGGGACAT AAAGAATCGC CTCCCCAGGA GTATTACGAC CTTGGATTGG 
GACGTGGCCT TCGTCAGCGT ATACAGCGTA GACAATCCGA ATCTGTTGTT TGATATGAGT 
GGATTTGAGG TTCGTATTCA GCCGATCAAG ACAGCTCGTC GATCTGCCGC CGGCGCTTTT 
CAGTCTCCTG TAGCCCCGAC AACCTACAAG GATGGTGTTT GGAACCTCCA AAACGAAACG 
ACGAAAGAGA TGACAGCTCA AGCTCATCTG TGTGTCGAGG AGGAAGCAGT TCGGGCCTTC 
GATAATCGTA TCCGCCAGAT TCTAATGAGC AGTGGCGCCA CCACTTTTAC GAAGATCGCG 
AACAAATGGA ACACAGCGCT AATTGGTTTG ATGACATACT ATCGTGAAGC CGTATTAAAC 
ACACAAGAGC TGCTTGATCT TCTTGTTAAG AACGAGAATA AGATTCAGAC AAGAATTAAG 
ATTGGCTTGA ACAGTAAGAT GCCCAGTCGC TTTCCTCCAG TTGTGTTTTA TTGTCCCAAG 
GAGCTAGGTG GTCTTGGAAT GCTTTCGATG GGGCATGTAC TTATACCCCA GAGTGACCTT 
CGATACAGCA AACAAACTGA TATGGGGGTC ACACACTTCC GTTCTGGTCT TAGCCATGAT 
GCCGACCAAT TGATTCCCAA TTTATTCCGG TATTTGCAGC CGTGGGAAAG CGAGTTTGTC 
GATTCGCAAC GAGTGTGGGC GGAATATGCC TTGAAGCGCC AGGAAGCGAA CACTCAGAAT 
CGTCGGCTAA CGCTCGAGGA CCTCGAAGAC TCATGGGACC GTGGAATTCC AAGGATCAAT 
ACCCTCTTCT CAAAGGATCG TCATACGCTT GCGTACGACC GTGGCTGGCG AAGTAGAGAG 
GAAATGAAGC GCTACCACAT TCTTCGGGTA AATCCCTTTT GGTGGACTCA TCAACGACAC 
GATGGAAAAC TTTGGAATCT GAATGCATAC CGTACGGACA TGATCCAAGC ACTAGGCGGC 
GTCGAAGGTA TCCTAGAGCA TAGTCTTTTC AAAGGCACCT ACTTTCCGAC CTGGGAGGGT 
TTATTTTGGG AAAAAGCTTC TGGATTTGAG GAGAGTATGA AGTTTAAAAA GCTGACGAAT 
GCCCAACGGT CAGGTTTGAC CCAGATTCCC AACCGACGTT TTACTTTATG GTGGTCTCCA 
ACTATCAATC GAGCCAACGT CTACGTTGGT TTTCAGGTGC AGCTAGACTT GACGGGGATT 
TTTATGCATG GCAAGATTCC TACTCTAAAA ATTTCGCTGA TTCAGATTTT CCGCGCTCAT 
CTATGGCAAA AGATACACGA AAGTATTGTA ATGGACATAG TGCAAGTCTT TGATCAAGAG 
TTGGATGCTC TCGAAATTGA AAATGTTCAG AAGGAAACAA TTCACCCTCG AAAATCTTAT 
AAAATGAACA GTAGTTGTGC TGATCTTGTC CTTTTTGCAG CTTACAAATG GCAAGTCTCA 
AAGCCCAGTC TTCTGCATGA TACGAAAGAC GACTACGATG GAACGACTTC AAACAAGTAC 
TGGCTAGATG TTCAGCTTCG CTGGGGCGAT TTTGACTCGC ACGACATTGA GCGCTACTCA 
CGGGCTAAGT TTTTGGACTA CACGACCGAC AACATGAGTA TCTACCCATC GCCAACTGGA 
TGTTTACTAT CCGTCGACCT GGCCTATTCT CTTTACAGCG GTTTTGGCAA CTTTATTCCC 
GGGGGAAAGC CACTTCTTCA ACAAGCGATG GCCAAAATTA TGAAGGCGAA TCCGGCTCTT 
TACGTACTCC GTGAGCGTAT CCGGAAGGGG CTACAGCTTT ATTCAAGTGA GCCTACTGAG 
CCGTATTTAA GTTCTCAGAA TTACGGTGAG CTGTTTAGCA ATCAGGTGAT TTGGTTTGTG 
GACGATACAA ATGTATACCG TGTGACGATT CACAAGACAT TCGAGGGCAA CTTGACGACC 
AAGCCTATAA ATGGTGCAAT TTTTATATTT AACCCAAGGA CTGGTCAGCT CTTTTTGAAA 
ATTATTCACA CGAGTGTTTG GGCTGGACAG AAGCGCTTGT CACAACTTGC AAAGTGGAAG 
ACTGCTGAAG AAGTTGCCGC GCTGATTCGT TCTCTTCCAA TCGAAGAGCA GCCGAAACAG 
ATTATTGTTA CGCGGAAGGG TATGTTGGAT CCCTTAGAGG TCCATTGCTT GGATTTTCCA 
AATATCGTGT TGAAAGGCTC AGAGTTGCAG CTACCCTTCC AAGCTGCGCT CAAGGTTGAG 
AAATTCGGAG ACCTTATCTT ACGCGCCACG GAGCCTCAAA TGGTGTTGTT TAACATCTAT 
GATGATTGGC TCAAGAGTAT TTCGTCGTAT ACTGCCTTCT CTCGTCTGAT TCTGATTCTC 
CGGGGCCTTC ATGTTCATAC TGATAAAGTC AAACAAATTC TCCGACCCGA TACCAGCGTT 
GTAACGGAAC CGCATCACGT ATGGCCATCC CTGACGGACG AGCAATGGAT CAAAGTGGAG 
GTGGCCCTGA AAGACTTGAT TCTTGCTGAC TACGGAAAGA AGAATAACGT CAATGTTTCG 
AGTTTGACAC AGAGCGAAAT CCGCGACATT ATCCTCGGAA TGGAGATTGC GCCTCCTTCT 
GTTCAGCGCC AACAAGTCGC CGAAATCGAG GCACAAGCTC GTGAACAATC GCAGATGACA 
GCAACCACAA CAAAGACGAC GAATGTACAT GGCGAACAAA TCGTTGTCAC AACCACTACA 
CAGTACGAGT CAGCGACGTT CCAGAGCAAG ACGGATTGGC GGGTACGCGC AATTAGTGCG 
ACTAATTTGC ACCTCCGAAC AAAGCATATC TACGTCTCTT CTGAAGACAT TTCGGAAGAG 
GGTCTTACAT ATGTACTACC CAAGAACATT CTTGCCAAAT TCATCACGAC AGCCGACCTT 
CGAACTCAGA TTGCTGGTTA CCTCTATGGA GTGACTCCCC CTGACAACGA TCTGGTTCGC 
GAAGTACGGT GTATTGTTAT GGTTCCACAA ATAGGTAACC ATCAGAGCGT AACACTACCG 
AAGAAATTAC CTGACAATGA TATCCTTAAG GAGCTGGAAC CACTTGGATG GATTCACACA 
CAGCCGAACG AACTGATTCA GAATGGGGTA CAGATACTGC CAGCACCCGA CGTTGTGACT 
CATGCTTCCA TCATGGCAGA CAATCCGAAC GCGTGGACTG GTGAGAGCGA GATCATTATT 
ACTACGTCCT TCACGCAAGG ATCGTGTTCG CTGACAGCTT ATCGCGTGAC TGAGAATGGA 
GTGCAATGGG GTAACAAAAG TCGAAACATT GCTGGTGGCG TAGCGAATGC CGAACAGTAC 
TCGTCCAGTT GTTTTGAAAA GGTGCAAATG CTTCTCAGTG ACCGCTTTAA GGGGTTCTTT 
ATGGTTCCGC AAGGCGGTCT TGGATGGAAT TACAACTTTC AGGGGGTGAA ACATAGTGCT 
GGAATGGATT ATGAGCTGAA AATGGACACT CCTGAACCGT TTTACGCAGA GTGCCATCGA 
CCGCAGCACT TCTTGTCATT TGTTCAAATG GAAGACGGAG CGGGCGATGA TGGCGCTGAT 
CTAGACGACT TCTTGGGCTA GACGATACCA GAGAGGCCTT TCATCCTACT AGTCTAAAAT 
AATATTATGG GTAGTAAAGG G 

 

Protein sequence

MQRKRYAHKR LNTFTAPQKE TLPPDFLRKI LQDHGDMSSK RYQSEKRIYL GALKYVPHAL 
YKLLENIPMP WESYKEVPVL FHVTGAISFI DHVPTVIEPV YRAQWGTAWL LMRREKRDRR 
HFKRMRFPPF DDEEPPLDYA DHLLTVEPGE AVQLDLQQDD DYALLRDWFY ESSQPLSDIR 
ETRQEPLADH VYVNGPSYKT WRLSTPVLAQ LYRLAEPLLN SQTDTNHRYL FDLPHFLTAK 
ALNVAIPGGP RFEPLFRDVE QDEDWNDFND VSKIIIRVPI RTEYKIAFPH VYNARPRKTV 
LSPYHDVPSS YAGDEDDDEP DLLCFEAYPS QLNPIVRVVH TKDWSVPEDV DEFEVEDFSW 
ELDEEVVGAP DLQPLLSDAP LATETTSSGV ALYWAPYPFN TRAGRTRRVL DIPLIGHWFR 
DRVSRDMNYP TKVRVSYQKL LKAWVVSQLH SRPAKPRAKR SLFKSLKSTK FFQCTELDWV 
EVGLQICRQG HNVLNLLIQR KQLNYLHLDY NFNLKPTKTL TTKERKKSRF GNAFHLVREI 
LRLTKLVVDA HVQYRLSNID AYQLADGLQY TFNHVGQLTG MYRYKYRLMR QIRTCKDLKH 
LIYYRFNTGP VGKGPGVGFW APSWRVWMFF LRGITPLLEK WLGNLLARQF EGRHSKSFAK 
NVTKQRVESH FDLELRASVM HDILDMMPAG VKQNKSRVIL SHLSEAFRCW KANIPWKVPG 
MPAPIENMIL RYVKAKADWW TNIAHYNRER IKRGGTVDKS VVKKNLGRLT RLWLKAEQER 
QHNYLKDGPY VSAEEAVAIY TTTVHWLESR KFTPIPFPPL SYKHDTKLLI LALERLKENY 
GLAIRLNSAA REELALIEQA YDNPHEALSR IKRHLLTQRT FKEVEVEFMD MYEFLSPVYT 
IEPLEKITDS YLDQYLWYEA DKRHLFPTWI KPADSEPPPL LVYKWCQGIN NLENIWQVDE 
NGDSVVLVQS KFDKLYEKMD LTLLNRLLRL IVDHNIADYM TAKNNVSIAF KDMLHTNSYG 
LIRGLQFSSF IVQYYGLVLD LLVLGLTRAS EIAGLPQRPN EYLTFADIET EVSHPIRLYT 
RYFDKIYMLF KFDTNDSKDL IQRYLTEHPD PNNENAVGYR NKKCWPRDCR MRLLKRDVNL 
GRAVFWDIKN RLPRSITTLD WDVAFVSVYS VDNPNLLFDM SGFEVRIQPI KTARRSAAGA 
FQSPVAPTTY KDGVWNLQNE TTKEMTAQAH LCVEEEAVRA FDNRIRQILM SSGATTFTKI 
ANKWNTALIG LMTYYREAVL NTQELLDLLV KNENKIQTRI KIGLNSKMPS RFPPVVFYCP 
KELGGLGMLS MGHVLIPQSD LRYSKQTDMG VTHFRSGLSH DADQLIPNLF RYLQPWESEF 
VDSQRVWAEY ALKRQEANTQ NRRLTLEDLE DSWDRGIPRI NTLFSKDRHT LAYDRGWRSR 
EEMKRYHILR VNPFWWTHQR HDGKLWNLNA YRTDMIQALG GVEGILEHSL FKGTYFPTWE 
GLFWEKASGF EESMKFKKLT NAQRSGLTQI PNRRFTLWWS PTINRANVYV GFQVQLDLTG 
IFMHGKIPTL KISLIQIFRA HLWQKIHESI VMDIVQVFDQ ELDALEIENV QKETIHPRKS 
YKMNSSCADL VLFAAYKWQV SKPSLLHDTK DDYDGTTSNK YWLDVQLRWG DFDSHDIERY 
SRAKFLDYTT DNMSIYPSPT GCLLSVDLAY SLYSGFGNFI PGGKPLLQQA MAKIMKANPA 
LYVLRERIRK GLQLYSSEPT EPYLSSQNYG ELFSNQVIWF VDDTNVYRVT IHKTFEGNLT 
TKPINGAIFI FNPRTGQLFL KIIHTSVWAG QKRLSQLAKW KTAEEVAALI RSLPIEEQPK 
QIIVTRKGML DPLEVHCLDF PNIVLKGSEL QLPFQAALKV EKFGDLILRA TEPQMVLFNI 
YDDWLKSISS YTAFSRLILI LRGLHVHTDK VKQILRPDTS VVTEPHHVWP SLTDEQWIKV 
EVALKDLILA DYGKKNNVNV SSLTQSEIRD IILGMEIAPP SVQRQQVAEI EAQAREQSQM 
TATTTKTTNV HGEQIVVTTT TQYESATFQS KTDWRVRAIS ATNLHLRTKH IYVSSEDISE 
EGLTYVLPKN ILAKFITTAD LRTQIAGYLY GVTPPDNDLV REVRCIVMVP QIGNHQSVTL 
PKKLPDNDIL KELEPLGWIH TQPNELIQNG VQILPAPDVV THASIMADNP NAWTGESEII 
ITTSFTQGSC SLTAYRVTEN GVQWGNKSRN IAGGVANAEQ YSSSCFEKVQ MLLSDRFKGF 
FMVPQGGLGW NYNFQGVKHS AGMDYELKMD TPEPFYAECH RPQHFLSFVQ MEDGAGDDGA 
DLDDFLG