| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_19979 |
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| Symbol | AOX1 |
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| ID | 7200599 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011675 |
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| Strand | + |
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| Start bp | 435282 |
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| End bp | 437625 |
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| Gene Length | 2344 bp |
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| Protein Length | 706 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | precursor of oxidase acyl-coa oxidase |
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| Protein accession | XP_002179644 |
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| Protein GI | 219117708 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.304645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTTCCCGTTA CCTCTGTCTC CCTCCCCAAA CTCCCGAGGT GAATTCTTTC AGCTCTCTTG
CATCTTACTC CTCAACATGC CAGTAAACGA AGACTTACGG CGCGAACGCG CGCGAGCGAC
TTTTGATGTA AAGCAACTCA CTCACATGCT TGATGGGGGT TCCGATCGGA CAGCCCGTCG
CCGTCAATTG CAAGCCATCA TTGAGCGTGA TCCCACCGGG ATTTTTTCAA ACGACGATAA
CGCTTATTTG CATCGAACTG ATCGTCATGT TCGTGGATTG GCCAAACATG TACGCATGGT
GGAACTTTGT CGGACACTCG GTATTGGAGA CAAATACGAC GGACAGGTAG TCATGGATCC
GGATTTTCCA GTCCTCTTGG CAGCGCTGGC GGATGATTTA CCGACGGCGC TCCATTGGAT
CATGTTTGTC CCCAACATTG TCTCTTTATG CGACGAAGAA CAGCAACGCG CCTGGTTACC
GCTTTGTCGG GATTGGAAAA TGATTGGATG CTACGCTCAA ACCGAACTCG GACACGGATC
CAACGTGCGG GCCCTCGAAA CTACAGCAAC GTTCGTGTCG GAAGATCAAG ACGGCACAAA
GGGCGGCTCG TTCGTTATCA ATTCGCCGAC GATCACATCA GCCAAGTTTT GGCCCGGAAC
CCTGGGAAGG ACGGCAAATC ACGCTATGGT GATTGCCCGG CTTATCGACG GCCACGGTAA
AGATCAAGGC ATGCACAATT TTTTGGTACC CTTACGTTCA ATGAAAGATC ACAAGCTGCT
ACCAGGAGTC AAGTCGGGTG ACATTGGACC CAAGATTGGT AGGTTGGTGG AGACGATTTG
ATGGATGGGA ATGCGTGCGT ACAGTTACAG CAATTCATCG TTGTTTTGTT TTCAATAGGG
TACAACGTGA TGGACAACGG TTTTGCTCAA TTCGATAACG TTAAAATACC ACGTCGAAAG
TAAGTCTTTC TGAAAATCAA GAAAGTTTTG TGGCGTTTTG CTTTCGCTAA CCATAATTTG
TGTTAGCATG GCCATGCGAT TCGCACATGT CGACGAACGT GGCCGTTACT CCAAAAAAAG
CGTCTCGGCT GCGGCCTCAA AAATCTCGTA CATTACTATG ATGCAAGTCC GGGCGCACAT
ATGCAACGAA GCGGGTAAAA ACTTGGCAGT AGCCTGTACG ATTGTCACCC GTTACTCCGC
CTTGCGTCGG CAAGGTTACG CTTCGGATGG TGAATCGGAA TTGCAAATTC TGGATTACAA
GCAACAGCAG CATCGGGTGT TCCCACTTAT TGCGGCGTCG TACTGTTTCT TTTTTACAGG
AAAGCGCGTG ATGGAGCAGC TCAAAGATAT CGAAGACAAA CTTGTGTCGA ATAAGTCCAT
TTCCAAAGCA GCAGTCACAG ATATCCACGC GTCCTCGTCG GCACTCAAAT CATTTACAAC
AACAGTGGCA GCTGACGGGA TTGAAGATTG TCGCAAAGCA TGTGGTGGCC ACGGCTTTTT
GCAATGTTCT GGCCTCCCCG AACTGATTAC GACCTACTTA CAGAGTCCGA CTGTGGAAGG
TGACAATCAG ATGTTGCCCC AGCAAGTCGT TAAGGTGCTA CTTAAACTCG TCCAGACTGT
ACAGGACGAC GGCGATTTAT CTGACTACGT ATCTTGCGAT TCGTATGGTT TAATTTCCTC
TCTACAGTCT AATTTGAAGG GCGTAAAAGA AGACTGCCGG ATTGTTTCGG AAATCGACGT
GATGAATTTG GACGCTTTAC TGGCTGCTTT GTGTCACCGA TCCGCTCGTC TTCTGGTGGG
CGTAGCGTCT CAAATACAAG GCTCAATCTC AAGCGGCAAA TCCTATCAGG AAGCTTGGAA
TGATGCTCTA GTAGAAATGG CCAGAGTCTC GCGTGCCTAT TCTCAATTCC TCTTGCTTCG
TAACTTCATG GAAGGCATCG ACGGCGAAGA GAGGTCAGGT GCGATCGGTG TTGCCGAAGT
GACCGTGCTG CAGAATCTCG CTCGACTTTT CGCCCTTTAT TGGATGGAGA AGGAACTCGG
TGACTTTTTA GAAGACGGTT ACGTGACGGC CGACCATTCT CGATGGGTCC GAAGCGCTGT
TTTGCAGCTT TTGGATTGCA TTCGTACTGA TGCGGTCTCT CTCGTAGATG CTCGAGACTT
TTCTGACTTT AAGCTGAAGA GTGCTTTGGG TCGTTACGAC GGGGATGTGT ATCCTGCCAT
CTTAAAAGCT GCTTTGCGAG ATCCTTTGAA CCACTCGGAT CCTGGACCTG GCTACGAACA
GCACTTGAAA CGGTTGATTG CTGGTGGTAC TGGTACATAT AAAGCGACAG TATCCCGTCT
ATAA
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| Protein sequence | MPVNEDLRRE RARATFDVKQ LTHMLDGGSD RTARRRQLQA IIERDPTGIF SNDDNAYLHR
TDRHVRGLAK HVRMVELCRT LGIGDKYDGQ VVMDPDFPVL LAALADDLPT ALHWIMFVPN
IVSLCDEEQQ RAWLPLCRDW KMIGCYAQTE LGHGSNVRAL ETTATFVSED QDGTKGGSFV
INSPTITSAK FWPGTLGRTA NHAMVIARLI DGHGKDQGMH NFLVPLRSMK DHKLLPGVKS
GDIGPKIGYN VMDNGFAQFD NVKIPRRNMA MRFAHVDERG RYSKKSVSAA ASKISYITMM
QVRAHICNEA GKNLAVACTI VTRYSALRRQ GYASDGESEL QILDYKQQQH RVFPLIAASY
CFFFTGKRVM EQLKDIEDKL VSNKSISKAA VTDIHASSSA LKSFTTTVAA DGIEDCRKAC
GGHGFLQCSG LPELITTYLQ SPTVEGDNQM LPQQVVKVLL KLVQTVQDDG DLSDYVSCDS
YGLISSLQSN LKGVKEDCRI VSEIDVMNLD ALLAALCHRS ARLLVGVASQ IQGSISSGKS
YQEAWNDALV EMARVSRAYS QFLLLRNFME GIDGEERSGA IGVAEVTVLQ NLARLFALYW
MEKELGDFLE DGYVTADHSR WVRSAVLQLL DCIRTDAVSL VDARDFSDFK LKSALGRYDG
DVYPAILKAA LRDPLNHSDP GPGYEQHLKR LIAGGTGTYK ATVSRL
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