Gene PHATRDRAFT_19954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_19954 
Symbol 
ID7200713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand- 
Start bp369004 
End bp369824 
Gene Length821 bp 
Protein Length176 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179837 
Protein GI219118111 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.127434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAAGTAGTA CCCCCAGTAG CCAAGACTAC TCGATCTTCA TTCCATTCTC TCCGGTAAGC 
AAATAACAAC GTAGCAAAAT GGCGAGCAGT ACCGGAGTTC TTTTCAGTGG CGAAAGTGAA 
AGAAAGCGTA CCCTGTTGGG TAAACTTGGC GGAAAAGATA TTTTGAACGA AGCAGTGGAT 
GTCTTTTACG AACGATTGCT GCAAGACGAC GATATGAATC AATTCTTTCG AGGAACCGAC 
ATGCAGATTC TCAAATGGCA CCAACTGAAC CTCATGTCGG TCGCGTTCAC AAAGGTTCCC 
GACAATTTCG ACCTTGCCAG CATGATTCTT CGGCAACACC GTCGTTTCTT CGAGATGGGC 
ATGACGGAAT TTCATTTTGA CATTTTTGTA GGTCACTTCA AGGCAGCTTT CCAGACTTTG 
AATGTCGAAG CAGAGCTAGT TGATGAAGCC TCCACCGTTA TTCGGTCGTT GCGTCCTGCC 
TTTGTGCAAG GTGCGATGCA AGAGAAAGAA AGGAGAAATG CGAAGACAAA GCGACGCATC 
CTTTCGCTAG TTGCTCTTGT TGGTGTTGCT GTTCTCCTCT TGCATCGTAG CAATAGGAGA 
CGCTTATGAC TGTAAGTCAA GGCTGTACAA ACCTCCAATT ATAAAGTTAC GGTACGAAGG 
AGTATGTCAT CCGTTGTCTC TAGAGCGTCC CCACGTCGCA GTAGCGAACG CAAAGCTTCC 
ATAGCTACAA CCTAAGAAAG TCTTGCATTG CGAACACGGT AAGCTCCAAT AGAATTTTCT 
ATTTCGGGAT AAACCCTCTA GACTCCAACT CGCACTCCTC C
 
Protein sequence
MASSTGVLFS GESERKRTLL GKLGGKDILN EAVDVFYERL LQDDDMNQFF RGTDMQILKW 
HQLNLMSVAF TKVPDNFDLA SMILRQHRRF FEMGMTEFHF DIFVGHFKAA FQTLNVEAEL 
VDEASTVIRS LRPAFVQGAM QEKERRNAKT KRRILSLVAL VGVAVLLLHR SNRRRL