Gene PHATRDRAFT_19937 details

Gene Information

• Locus tag: PHATRDRAFT_19937
• ID: 7200572
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: -
• Start bp: 298040
• End bp: 301515
• Gene Length: 3476 bp
• Protein Length: 1012 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002179824
• Protein GI: 219118084

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGTCAA CCAACAAAAC CGAAACTATT CAGTGGTGCT CGGATGCCTT GCACGATTTG 
TTGGGCTTTG CCGACACGGC GTTGGCTTCG TACCTGGTCA GCGTTGCGAA GAAGGCAACA 
CAATCGTCGG AAATCGTCCA GATCCTCGTG GATGGAGATG TACGAGACGT GACACCGGAA 
CGCATGGAAA GATTTGCTGA GCAATTGCTC TCGCACGCTC GACCGACACC GAAGCAAAGC 
CACGGCGGAC CTGCTTCTCG ACAAGCAAAG GCCATTCACA GTCAAACAAA AACGAACGCG 
GACTGGGTCA AGGCGGCTTC CAGCTATCAA CTGATTGATG TAGAGATCAG CGAAGAACCG 
TCTAATCTGA ATAAACCAAG CGACAGACGG AAGGGAAAGA AAGACAGACA GGATAAAAGG 
GATTCTTCCC TTTCCGAACG TGTTGGCGAA AAGTCGCGTC GAAGAAAACG GCAGTACCGC 
GATGGTGATT CTGGTAGCAG TGACAGCAGC AATGCAGAAG ACGGAGCTGG GGCTAGAGTA 
GCTGAACGGT ACCGTCGGAA AGCCGAAGAG CGTCGAGAGC GGAGAAGGCA TCGCCAAGTG 
GAGTCAGCTC TTACTCCTGC AGAGCGCGTG GAACTAGAAA GGGAAAAGGA TCTGAAGGAA 
CGAGACGAGC TTGTACAGCG CATGATGGAA CGCGATCAGA CAAAAACAAA ACAAAAGGCA 
AAGTCAGAAG AAAAATCTGA TTCTGTTCAA AACCTAGCAG AAATCGAGGA GAGGCTAGCA 
AAGGGAGAAC CAATGTATGA TGATGCTACA GGGAATGAGT TAACGTTGGA GCGACTCCGC 
GAGGAGAGCC GTCGTGCGTA TCTGAAGAAG CGAGAAGAGC GTGAGCTAGC CCTATTGAAA 
CAGTCGCTTC AGGATGAAGA GGATCTTTTT AGAGGCGCAA AATTAACGGA AGCAGAAAAA 
AAGCGAATTC AGATGGGGAA GCAGATCCTT AGCATGGTTG AGGAGAGAGA CGGTGAGGAA 
GACAAGGATG ATGAATTTTA TCGGTTACCT GGGGACTTTC ATGAGAAACA CTCAAGGGCT 
AAACAGCAAG AAGCATTGCT GACGTCCCGC TATAACGAGC CTAAACTCGA AAAATCGGAA 
CAGGATCTGT GGGAAGAGTC GCAAACGCAA AAGGCTGGTG CTATTGGCGG GCGCCAGAAG 
AAGGCGATTG AATCAGACGG TTACGAGTTG TTGTTCGACG ATCAGATCGA TTTTGTTATG 
CAGGAAACTA GAGAAGGCTA TGACAAACGT GGCAAGAGAC ACAAGTTGCG AGACCATACT 
CGTCAAATTA GAGACGAGAG TCTGTCAGAG ATGCGTCCAG CAACTGAGCA TGAAAAGATT 
CTGGAAGGGC GTACCAAACT TCCTGTTTAC GCTTATCGCG AAGAATTCCT AGCTGCAGTC 
AAAGAGCATC AGATTCTCAT CTTAGTGGGA GAAACGGGCT CGGGTAGGTC TTAGTCTGTA 
ACTTTTGGCT TTTGGGAATC TAGTTGCGAA TGTCTCTGAT TCTATATCCG TTCTTTCTTA 
CTTTTAGGCA AAACGACACA AATTCCTCAA TTTCTCAACG AAGTTGGATA TGGTGAGCTG 
GGGAAAATTG GTTGCACGCA GCCTCGGCGC GTCGCTGCAA TGAGTGTGGC AGCTCGTGTC 
GCGCAAGAAA TGAACGTCAG GCTCGGGCAC GAAGTTGGCT ACTCCATTCG ATTCGAGAAT 
TGCACAAGCC CCAAGACGAT TCTCCAGTAC ATGACGGACG GTATGCTTCT GAGGGAAATT 
TTGACCCAAC CAGATTTGGC GAGCTACTCA TGCATGGTAA TCGACGAAGC ACATGAGCGC 
ACGCTACATA CGGATATACT TTTTGGTCTC GTCAAGGACA TTGTGCGTTT CAGAAGTGAT 
CTTAAACTCA TCGTCAGTAG TGCAACGCTT GATGCCGAAA AATTCTCGAA GTATTTTGAC 
GATGCCAGCA TTTTCATGAT TCCCGGTCGT ATGTTTCCAG TCGATACATA TTACACAAAA 
GCCCCGGAAG CTGACTATGT TGACGCGGCG GTTGTCACCG TGCTACAGAT ACATGTATCC 
CAGCCGCTCA ACGGAGATGT GCTAGTATTT TTGACCGGTC AAGAGGAAAT CGAGACTGCG 
GCCGAAACCT TGTCCGAGCG TTCGAAAAAC CTTGGCTCTC GCATACCTGA GCTAATCATT 
TGTCCGATTT ACGCCAACCT TCCCTCAGAG CAGCAAGCGA AAATCTTTGA AAAGACTCCA 
AGCGGTGCTC GCAAAGTAGT TCTTGCTACA AATATCGCAG AGACAAGCCT TACAATTGAC 
GGGATCTGTT ACGTGATAGA TACTGGGTTC AATAAACAAA AAACATATAA TGCCAGATCT 
GGCATGGAAT CTCTGGTCGT AACTCCCATT TCACAAGCAG CCGCTAACCA ACGAGCTGGT 
CGAGCAGGGC GGACGCAACC AGGCAAGTGT TTTCGGCTCT TTACAGCATG GTCTTTCCAA 
CATGAACTTG AACCAAACAC CGTGCCGGAG ATATTACGGA CGAACATGGG AAACGTTGTT 
TTAATGTTGA AGAGTCTCGG AATCAACGAT CTTTTGAATT TTGACTTCAT GGACCGGCCT 
CCTGCCGATG CTTTGATAAG AGCTCTTGAA CAGCTGTACG CCCTCGGTGC GCTCAATGAT 
CGGGGAGAAT TGACAAAACT CGGTCGTCGA ATGGCAGAAT TTCCTTTGGA TCCTATGCTA 
AGTAAATCTG TAATTGTGTC CGAAAAGTAT GAATGCACAT CCGAGGTGCT GTCGACCGTC 
GCGATGCTTT CTCTAGGTGC ATCGGTTTTC TATCGGCCAA AAGAAAAGGC AGTACATGCC 
GACACGGCGC GACTTAATTT TGCCCGCGGT GGTGGAGGTG ACCATATCGC TCTGCTTCGA 
TGTTACTCTG AATGGGCAGC ATCTGACTTC AGTCCTTCTT GGTGCTTCGA AAATTTTGTT 
CAAGTCAAGA ACATTAAAAA AGCCCGTGAC ATTCGGGAGC AGCTAGCAGG ACTTTGTGAT 
CGTGTAGAGA TTGATCATAC AGTTTCGAAT TCTGACGATT TCGACGCTAC TCTGAAAACA 
ATTACTGCTG GTTTCTTTTA CAACATTGCG AAACTTGGTC GTACTGGAGA GTATCAGACA 
GCGAAGCAGC ACAAGACTGT GTATATTCAT CCTAGCAGCG TAATGGCAAA AGAGGAAGAG 
CCGCCACCGT GGCTAGTATT TTTTGAGCTT ACCTTTACAA CAAAGGAATT CATGAGACAG 
GTAGCCCCTA TCAAGCCATC GTGGTTGGTT GAAATTGCAC CGCACTATTA TCAAGAAACT 
GATATCGAAG ATTCGAAGAC CAAAAAAATG CCGAGAACGA GACGCAATTG ATGATTTGCT 
GTTTCACCTG CAAATTAGAA TACTGTTTGG AATTCTTGTT TTTTTTTAGG ATGGTG 

 

Protein sequence

MPSTNKTETI QWCSDALHDL LGFADTALAS YLVSVAKKAT QSSEIVQILV DGDVRDVTPE 
RMERFAEQLL SHARPTPKQS HGGPASRQAK AIHSQTKTNA DWVKAASSYQ LIDVEISEEP 
SNLNKPSDRR KGKKDRQDKR DSSLSEPLTP AERVELEREK DLKERDELVQ RMMERDQTKT 
KQKAKSEEKS DSLTLERLRE ESRRAYLKKR EERELALLKQ SLQDEEDLFR GAKLTEAEKK 
RIQMGKQILS MVEERDGEED KDDEFYRLPG DFHEKHSRAK QQEALLTSRY NEPKLEKSEQ 
DLWEESQTQK AGAIGGRQKK AIESDGYELL FDDQIDFVMQ ETREGYDKHE SLSEMRPATE 
HEKILEGRTK LPVYAYREEF LAAVKEHQIL ILVGETGSGK TTQIPQFLNE VGYGELGKIG 
CTQPRRVAAM SVAARVAQEM NVRLGHEVGY SIRFENCTSP KTILQYMTDG MLLREILTQP 
DLASYSCMVI DEAHERTLHT DILFGLVKDI VRFRSDLKLI VSSATLDAEK FSKYFDDASI 
FMIPGRMFPV DTYYTKAPEA DYVDAAVVTV LQIHVSQPLN GDVLVFLTGQ EEIETAAETL 
SERSKNLGSR IPELIICPIY ANLPSEQQAK IFEKTPSGAR KVVLATNIAE TSLTIDGICY 
VIDTGFNKQK TYNARSGMES LVVTPISQAA ANQRAGRAGR TQPGKCFRLF TAWSFQHELE 
PNTVPEILRT NMGNVVLMLK SLGINDLLNF DFMDRPPADA LIRALEQLYA LGALNDRGEL 
TKLGRRMAEF PLDPMLSKSV IVSEKYECTS EVLSTVAMLS LGASVFYRPK EKAVHADTAR 
LNFARGGGGD HIALLRCYSE WAASDFSPSW CFENFVQVKN IKKARDIREQ LAGLCDRVEI 
DHTVSNSDDF DATLKTITAG FFYNIAKLGR TGEYQTAKQH KTVYIHPSSV MAKEEEPPPW 
LVFFELTFTT KEFMRQVAPI KPSWLVEIAP HYYQETDIED SKTKKMPRTR RN