Gene PHATRDRAFT_12238 details

Gene Information

• Locus tag: PHATRDRAFT_12238
• ID: 7200673
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 119826
• End bp: 120380
• Gene Length: 555 bp
• Protein Length: 184 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002179583
• Protein GI: 219117581

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGGCGCAAGG CAAAAACTAA GACGATCAGT GAAGTGTCCG GTAGTGGTCG AAAAATTCGG 
AATCAAAAAG GCACTGGTAT GGCTCGTGCT GGACATTCCC GCCCACCGCA TTTTCGGGGC 
GGTGCCAAGG CGCATGGCCC CAAGAATGTG ACCGACTATG GCAATACCAA ACTCAACAAG 
AAAGTACGAA AGCTGGCTCT GGTGCATGCG CTCAGCCAAA AGCTATTGGA GGGAAATTTG 
ATTATCTTAA ATAGCCTGAA AGAGCTACCA TCACACAAAA CAAAGGAGCT GACACGGTTT 
TTGGAACCCT GGGATATTGG GGGGAAAGAT GGCGCAACTG CACTGATTTT GGACGCCTAC 
ATATCGGAGG AAGAAGGCCA GCCGCAGTCA TATAAAGGCG TGCCAATGAA TCTTTGGGTA 
GCGTCCTCAA ATATTTACAG GATTAAAGTC GGCAACCATC TCGCGGCTTG TGTGTACGAT 
ATTCTTAAAC ACGAGAAGTT GGTACTCACG CTGGCGGCAT TGGAAAAATT GGAGGATCGA 
CTGCGAGAAG TGTAA 

 

Protein sequence

RRKAKTKTIS EVSGSGRKIR NQKGTGMARA GHSRPPHFRG GAKAHGPKNV TDYGNTKLNK 
KVRKLALVHA LSQKLLEGNL IILNSLKELP SHKTKELTRF LEPWDIGGKD GATALILDAY 
ISEEEGQPQS YKGVPMNLWV ASSNIYRIKV GNHLAACVYD ILKHEKLVLT LAALEKLEDR 
LREV