Gene PHATRDRAFT_12233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12233 
Symbol 
ID7200395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp758394 
End bp758933 
Gene Length540 bp 
Protein Length179 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179908 
Protein GI219118259 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAAG AAGACCGTGT TGACAAGGTT GCCGAACCTG AACGCCGCGC TTTTACGTAT 
TTGATGCTTT CTTCTGTCCG TTTCGCTTAC GCTTCGGCTG CCCGTCTTCT GGTCGTTAAG
TTCGTCGCTT CCATGAGCGC GTCCGCCGAT GTTCTTGCTC TTGCGTTCTC TGAATTTGAT
CTCTCTTCTA TTGAAATGGG AAAGACCATT ACCGCGAAGT GGCGCGGAAA GCCTGTTTTT
ATCCGACGCC GATCGGCGGC TGAAATTGCC ACCGAAGCGG CCGTTCCAAT GGAATACCTT
CGTGATCAGG AAACTGACGC AGACCGTACC CTCAAGCCTG AATTTATTGT TGTGTTGGGT
ATCTGTCCCC ACTTGGGTTG CGTGCCTGTG TCCAACGCAG GTGACTTTGG TGGATGGTTC
TGTCCGTGTC ACGGATCTCA CTACGATAAG TCCGGACGTA TTCGAAAGGG ACCGTCTCCG
CTGAACTTGG AAGTTCCGCC ATACAAGTTT ATCGACGAAA ACGTCATTTT GATGGGTTAA
 
Protein sequence
MFEEDRVDKV AEPERRAFTY LMLSSVRFAY ASAARLLVVK FVASMSASAD VLALAFSEFD 
LSSIEMGKTI TAKWRGKPVF IRRRSAAEIA TEAAVPMEYL RDQETDADRT LKPEFIVVLG
ICPHLGCVPV SNAGDFGGWF CPCHGSHYDK SGRIRKGPSP LNLEVPPYKF IDENVILMG