| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_12174 |
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| Symbol | |
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| ID | 7200679 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011675 |
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| Strand | + |
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| Start bp | 148944 |
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| End bp | 150800 |
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| Gene Length | 1857 bp |
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| Protein Length | 585 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179590 |
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| Protein GI | 219117595 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCGT TTGATCTCTT CCAGTCACAA CTCGAATCCA ACTCGACCGA AGCCGAAATT
GACGCCATGA AGCGTTTAGC CGTTGTTGCC ATTACTATGG GAAAAGATGA CGCCCAAGCT
ACGCTCATAC CCTATCTAAC ACAGATAGGT ACCGCGCAGC CGCTTCCTTC GGACGAACTC
TTGCTTATTC TCGGACAGGA ACTGCCCGCC GTCGCCAAGT TCATCGGCCC CGCTTGTGTT
GTGGACTTTT TGCCCCTTCT CGAACGTCTC GCCGCGGTAG AGGAAACAGT CGTTCGCGAT
CAAGCCGTCG TGGCGCTGTG CGAACTCCTT GGACAGGCAG GGACCGGGCT GGACGCCATT
CCCTGGACGG CACTCGCCAA ACGTTTGGGC TCGGCTGACT GGTTCACCGC CAAAGTCTCC
GCTTGCGGCG TCGTAGCTTC TATTCTCCAA CTCAATAACA GTAATTCGGA AGAGTTACTC
GCGCTTTACA AAGATCTCTG TCAGGACGAG ACACCCATGG TGCGGCGGGC AGCAGCCAAG
CATATTGGCA AAGTTCTCGG TGTCGCTGGG TACGAGCAAC GTGATTTTTG CACCGCCACC
TTGCCCGTAC TCTGTCGGGA CGAACAAGAC TCGGTCCGAC TCTTGGCGAT CGGGTCCTTG
GCCGATGCGG GATCCAGCTT TTCTGTGCAT CCGTCGTGGA CTGCCACAAA TTGGTTGCCC
TTGGTCAAGG ACGGATCCAC CGATATGAGT TGGTACGTGT AAAAAAGCAG AGAGAGCTCG
CCTTGCAGCG TATGCAGCCC TCCCAATGGT CGCTTTCCCT GTCTCACCGT TTGTGATTTC
TTGACTCGTA GGCGTGTGCG AAACAATTTG GCCAAGAATT TCGCCAACGT TGCCAACAAC
CTTGGTTTTC AAAACGATCC TGACCAGCAG ACCGAGCAAA GTGTCGTTAT GGCTTGCTTC
GTGGCTCTCT TAATGGACTC GGAAGCGGAA GTCCGAGCGG CCTCCGTCGG TCACCTTTCC
AAAATGGTGT CTTGGGGCGG AGCGACTCAC TTTTCGAGCC ATCTCCAATC CTTGTTGCCG
GCGTTAGCCG ACGATGTGGT CATGGAAGTC CGCAGCAAGT GTGCTCTCGC ACTCATGAGC
GCCGCGCACA GCGGCGTCCT CGATGATGCG GTCATTCTCC AGAGCTTCGG TCCCTTGCTC
GAAAGCTTTT TACAAGACGA ATTCCAAGAA GTCCAGTTAC AAGTATTGAC CAATCTCGAC
AAGATTGCAC ATTTGCTGCC CGCACTGTCG GGCGTTGTGA CCAGTTTGCT GCAAATGTCC
AAGGCCAGCA ATTGGCGCGT ACGGGAAGCC GTCGCCCGGC TTTTGCCGCA TTTGGCCCAA
ACTCGTGGGC TCGACTTTTT TGCCAATGTT CTTTTGGAGC CCGCTTGGTT GACTCTCCTA
CTGGACCCGG TCGCCACTGT CCGCAATGCC ATTGTCCGCG GTATGCCATT GTTGGTAAGC
GCAACCGGGG AAGAATGGTT GACGTCCAAA TTGATACCGG AGCACGTACA AATTTTCAAC
CAAAATTCAT CGTCCTACCT CATTCGTATG ACAATTATAC AAGGTCACGT GGAAGCAGCC
GTGGCGCTGA AGGATGGCCC CCTGTGGAAT GAATTAATGG TGCTGCTACT GCGCGGCCTC
AATGATCGCG TTCCCAATGT ACGCATGGTG GCAGCGCAAG GCCTGGCTCA AGTTATGCGT
GAAGGCGATT CAAGTGTGAT CGAAGCTAAG CTCCGCCCTG CGTTGGAGAA GCGGTTGCAA
GAAGATAATG ATGAGGATTG CCGGCGTTGT ATTTCTCTAG CTCTGGAAGT GGAATAA
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| Protein sequence | MSAFDLFQSQ LESNSTEAEI DAMKRLAVVA ITMGKDDAQA TLIPYLTQIG TAQPLPSDEL
LLILGQELPA VAKFIGPACV VDFLPLLERL AAVEETVVRD QAVVALCELL GQAGTGLDAI
PWTALAKRLG SADWFTAKVS ACGVVASILQ LNNSNSEELL ALYKDLCQDE TPMVRRAAAK
HIGKVLGVAG YEQRDFCTAT LPVLCRDEQD SVRLLAIGSL ADAGSSFSVH PSWTATNWLP
LVKDGSTDMS WRVRNNLAKN FANVANNLGF QNDPDQQTEQ SVVMACFVAL LMDSEAEVRA
ASVGHLSKMV SWGGATHFSS HLQSLLPALA DDVVMEVRSK CALALMSAAH SGVLDDAVIL
QSFGPLLESF LQDEFQEVQL QVLTNLDKIA HLLPALSGVV TSLLQMSKAS NWRVREAVAR
LLPHLAQTRG LDFFANVLLE PAWLTLLLDP VATVRNAIVR GMPLLVSATG EEWLTSKLIP
EHVQIFNQNS SSYLIRMTII QGHVEAAVAL KDGPLWNELM VLLLRGLNDR VPNVRMVAAQ
GLAQVMREGD SSVIEAKLRP ALEKRLQEDN DEDCRRCISL ALEVE
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