Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12161 |
Symbol | |
ID | 7200396 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 759930 |
End bp | 760758 |
Gene Length | 829 bp |
Protein Length | 250 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179710 |
Protein GI | 219117846 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGATTA GCGCAGAAAC CATACAGCAG GCCGAGCAGC GTGTGAATCC CGACGGTGAG CGCGAGCTTG TGCTTCGGGA GCTAGCGATT CCTTTCATCG AGAATATGGG CGCTGCTCGG GATGATTACG ACGCTTGGGA CTTGACCAAC AATCGAATAG TGCGCCTGGA AAATTTTCCA CGGGTACGAA GGCTCGCGAC ACTTCACTGC TCGGGGAACA ACATTGAAAG TGTGGACGCC ATAAATATTT CCAAAAATGC AAATTGCATA CGACATCTCT ACATGAGTGA CAACAACATT GCGTCTCTGG GGGAACTGGT TAATATCGGT GAAGCGTGTG CAGGCCTCGA GCATTTATGT TTAGTTGGGA ATGCCGTAAC TCGTAAGTGG AGTATGGTAT GACTGTGAAT AGTGTCTTGG CGAATCATGG CTTCTTACCA GACTTGCTTC TACACCAGGG CAACAACATT ACCGACTGTT TGCTATTGCC AAGATTCCAT CTCTTAAAGT TTTAGATTTT CGAAAAATTA AGCCAGGTGA GCGCGAGAAA GCTGCCAAGT TTGCTATCAG CACGGCTGGT GCTGCACTAG AGGAGGATGT GCAAAAGTCT TTGCCCAAAA CTTTTGTTCC TGGTGAAGCA TTGGATGGCG GGCGGTCGTT TACTCACAGA TTCACGGCGG CTGAAAAGGA AAAGATTAGA GCTATGCTTG ATAATGCTAT GTCGGCCAAA GACGTAGAAG CAATCGAAAA TGCCGTCAGC AACGGTGTTC TACCGGCAGG ACTCGTAGTA GAAGAGAACC AGCCAGATTC GAAACGAAGG AAGATATAA
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Protein sequence | MRISAETIQQ AEQRVNPDGE RELVLRELAI PFIENMGAAR DDYDAWDLTN NRIVRLENFP RVRRLATLHC SGNNIESVDA INISKNANCI RHLYMSDNNI ASLGELVNIG EACAGLEHLC LVGNAVTRQQ HYRLFAIAKI PSLKVLDFRK IKPGEREKAA KFAISTAGAA LEEDVQKSLP KTFVPGEALD GGRSFTHRFT AAEKEKIRAM LDNAMSAKDV EAIENAVSNG VLPAGLVVEE NQPDSKRRKI
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