| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_12157 |
|---|
| Symbol | |
|---|
| ID | 7200723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011675 |
|---|
| Strand | + |
|---|
| Start bp | 453704 |
|---|
| End bp | 454747 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179648 |
|---|
| Protein GI | 219117716 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCCTATCGTG ATTCTCAGTT CGACAAGGTC ATCCACGCCG ACGTTGTCAG TTTAGCTACA
CTCCGCCCGT TGACCTGGAA TGGTATTCCA CCGCCACACC GGGCCCTGGC CTGGAAGCTC
CTGCTGGGTT ACGTCCCCAC CAATGCATCC AGACGCAGCC ACACCCTCAC ACGCAAACGC
GCCGAATACC GCGAAGCCAT AATTCAGCAC TACGACATTG CCGACCAGAA TACCCGCACT
CTGCAGGAAC AAGAGTGCTT GCGACAAGTA CTGGTGGACG CACCCCGAAC CGCTCCGGAT
ATTCCGCTCT TTCGCAACGA CAGAATTCGT CGTCTTCTAT CCCGACTACT CTACGTGTGG
GCGATGCGGC ATCCCGCCAG TAGCTACGTA CAGGGAATTA ACGACCTGGC CACGCCCCTG
ATTGTCGTCT TTTTGGCCGA TTACTGTTAC CGAGATCAGC TTAACCAAGA TGATGACGGA
CCCGAGCTGA CGACAGACCC GTTGCACACG GTGTTACAAG GCCACGTCAT GAACCACGTC
TCGGACGAAC GCTTGGATGA TGTCGAAGCG GACGTGTACG GCTGCCTCAC CAACCTGCTC
GCCGGCATTC AGGATCACTA CACGGCGGAC CAACCCGGCG TACAACGCAT GGTCATGCGC
GTGGAAGAAC TCGTCCGACG AATCGACGTC GATTTATGCA AGCACCTCGC CGCCGAAGGC
GTACAATTTC TACAGTTTGC CTTCAAGTGG ATGAACTGCC TGTTGCTCCG CGAATTCTCC
CTCCCGTGCG TGGTTCGCCT GTGGGACACC TACCTGTCCG AATCCAACGG TTTTGAAGAT
TTTCACGTTT ACGTGTGCGC CGCTCTGGTC TGCCAATTTT CTGCATCACT TCAAACCATG
AACTTTGAAA CGCTCTTTGC CTTTTTACAA GAGCTGCCCA CTGCCACATG GACCGATAAG
GAAATTGAAA TGCTTCTCTC GCAGGCCTTT GTGCTAGGGA CACTTTTTGG GGGAAGCGAC
GCACATCTCG TCCAACATGG TTAG
|
|---|
| Protein sequence | SYRDSQFDKV IHADVVSLAT LRPLTWNGIP PPHRALAWKL LLGYVPTNAS RRSHTLTRKR
AEYREAIIQH YDIADQNTRT LQEQECLRQV LVDAPRTAPD IPLFRNDRIR RLLSRLLYVW
AMRHPASSYV QGINDLATPL IVVFLADYYP LHTVLQGHVM NHVSDERLDD VEADVYGCLT
NLLAGIQDHY TADQPGVQRM VMRVEELVRR IDVDLCKHLA AEGVQFLQFA FKWMNCLLLR
EFSLPCVVRL WDTYLSESNG FEDFHVYVCA ALVCQFSASL QTMNFETLFA FLQELPTATW
TDKEIEMLLS QAFVLGTLFG GSDAHLVQHG
|
|---|
| |