Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12113 |
Symbol | |
ID | 7200431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 953192 |
End bp | 954046 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179753 |
Protein GI | 219117936 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.229578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAGGATGTTC AAGGGGCTGT CATCTTGCGA TTGCCTCCAG GCAAAAAGGT GGAGCACTTG GGCATCAAAG TGCAATTTAT AGGGCGCATC GATATGAGTA TAGGTGTTCA CGAAGGTCGC CCACACTACG ATTTTATTAG CCTGTCAAAG GAATTAGCCC CGCCCGGATC TTTGTACCAA ACTGAGACCA TGTACACTTT TCATTTTAAA AACATGGACA AGGAATTCGA GTCTTATTGT GGGCGAAACG TGGCAGTTCG GTATATTGTC AAGGTCAAGG TAGAGCGCAA GTTTTTGCCC CCACTCAAGC AGGAACAGGA TGTTTGGGTG CAGTTCCGTG GACAGGAGCC AATCTCACAC GAGTCTATCA AAATGGAAGT TGGAATTGAA GACTGCTTGC ATATTGAATT TGAATATGCC CGACGCCAAT ACCATTTGCG GGACACTATT ACTGGTAAAA TTCATTTTTT GCTCGTGCAA ATCAAAATCA AACACATGGA GCTAGCTGTC ATTCGAAGGG AAACCAGTGG AGAAGGTGTT GCGCTCGCAG CAGCTACAGA CGCCACCAAT CAAGGAAGTT CTTCCAACTC GAACGTCGAC GCCGCTGGCA ATATTTTTAC CGAAACTCAA ACCCTTGTCA AATACGAAAT CATGGACGGT GCACCCGTCA AGGGTGAAGT CATTCCGGTG AAATTGTCTT TGCAAGGTAT TCCTGCTGAT TTAACCCCAA CCTATACAGC CGTTAACAAT CGTTTTTCAG TGCGGTATTT TCTGAACCTG GTCTTGGTGG ATGAAGATGA CCGTCGGTAC TTCAAGCAGC AAGAAATAAT CTTATGGCGG AAAGACTTGG GGTAG
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Protein sequence | QDVQGAVILR LPPGKKVEHL GIKVQFIGRI DMSIGVHEGR PHYDFISLSK ELAPPGSLYQ TETMYTFHFK NMDKEFESYC GRNVAVRYIV KVKVERKFLP PLKQEQDVWV QFRGQEPISH ESIKMEVGIE DCLHIEFEYA RRQYHLRDTI TGKIHFLLVQ IKIKHMELAV IRRETSGEGV ALAAATDATN QGSSSNSNVD AAGNIFTETQ TLVKYEIMDG APVKGEVIPV KLSLQGIPAD LTPTYTAVNN RFSVRYFLNL VLVDEDDRRY FKQQEIILWR KDLG
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