Gene PHATRDRAFT_12113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12113 
Symbol 
ID7200431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp953192 
End bp954046 
Gene Length855 bp 
Protein Length284 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179753 
Protein GI219117936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.229578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAGGATGTTC AAGGGGCTGT CATCTTGCGA TTGCCTCCAG GCAAAAAGGT GGAGCACTTG 
GGCATCAAAG TGCAATTTAT AGGGCGCATC GATATGAGTA TAGGTGTTCA CGAAGGTCGC
CCACACTACG ATTTTATTAG CCTGTCAAAG GAATTAGCCC CGCCCGGATC TTTGTACCAA
ACTGAGACCA TGTACACTTT TCATTTTAAA AACATGGACA AGGAATTCGA GTCTTATTGT
GGGCGAAACG TGGCAGTTCG GTATATTGTC AAGGTCAAGG TAGAGCGCAA GTTTTTGCCC
CCACTCAAGC AGGAACAGGA TGTTTGGGTG CAGTTCCGTG GACAGGAGCC AATCTCACAC
GAGTCTATCA AAATGGAAGT TGGAATTGAA GACTGCTTGC ATATTGAATT TGAATATGCC
CGACGCCAAT ACCATTTGCG GGACACTATT ACTGGTAAAA TTCATTTTTT GCTCGTGCAA
ATCAAAATCA AACACATGGA GCTAGCTGTC ATTCGAAGGG AAACCAGTGG AGAAGGTGTT
GCGCTCGCAG CAGCTACAGA CGCCACCAAT CAAGGAAGTT CTTCCAACTC GAACGTCGAC
GCCGCTGGCA ATATTTTTAC CGAAACTCAA ACCCTTGTCA AATACGAAAT CATGGACGGT
GCACCCGTCA AGGGTGAAGT CATTCCGGTG AAATTGTCTT TGCAAGGTAT TCCTGCTGAT
TTAACCCCAA CCTATACAGC CGTTAACAAT CGTTTTTCAG TGCGGTATTT TCTGAACCTG
GTCTTGGTGG ATGAAGATGA CCGTCGGTAC TTCAAGCAGC AAGAAATAAT CTTATGGCGG
AAAGACTTGG GGTAG
 
Protein sequence
QDVQGAVILR LPPGKKVEHL GIKVQFIGRI DMSIGVHEGR PHYDFISLSK ELAPPGSLYQ 
TETMYTFHFK NMDKEFESYC GRNVAVRYIV KVKVERKFLP PLKQEQDVWV QFRGQEPISH
ESIKMEVGIE DCLHIEFEYA RRQYHLRDTI TGKIHFLLVQ IKIKHMELAV IRRETSGEGV
ALAAATDATN QGSSSNSNVD AAGNIFTETQ TLVKYEIMDG APVKGEVIPV KLSLQGIPAD
LTPTYTAVNN RFSVRYFLNL VLVDEDDRRY FKQQEIILWR KDLG