Gene PHATRDRAFT_12106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12106 
Symbol 
ID7200726 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp466553 
End bp467179 
Gene Length627 bp 
Protein Length170 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179651 
Protein GI219117722 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAGAACAAGG CGATACAATT TCTTGTACAA CACCTCGTCG ATCTCGGGTG TTCTCCACCG 
GAAGGATTCA TTCAGTGTGT GAGCTGCGAA AAACCGGCAG CAGGCGGATT TGGAATGGTT
CAAGAAACTT TAATACCCAA GACTGGCCGT ATCGATGGTT CCTCGGCAGG AGAGAGCAAT
CCATGTAGCA ACCCCACAGG TCAGGATTTA CGCAAACTTT TGGAACGCGA GCGAAACGGC
ACGTCCACAC TCCGCGTAAA CCCCGAAATA TTCATATGCC AGCAATACAT GGAAAATGAA
CGCATGGCGC ATAAAACACT TCACCACGAA CTCATTCACG CCATTGATAT GTGCCGAACC
AAAATGGACC CCCTCCATAA CTGCATTCAC ATGGCGTGTA CAGAAATTCG TGCCGAAAAT
TTGTCTGGCG AATGCTCATT CTTTAGAGAG ATACCTCGAA TGGAGAAACT GAAAGGACAT
GGTGCGGAAT GTGTCAAGCG ACGGGCGATC CTATCAGTGC GGGCCAATCC CAATTGTACC
GCCCGCGCCG GCGACTACGT CAACGCTGCC TTCGATCGCT GTTTTGCCGA CGTCTACCCG
TTCGACCGCC ATCCGAACCA ACGATGA
 
Protein sequence
QNKAIQFLVQ HLVDLGCSPP EGFIQCVSCE KPAAGGFGMR NGTSTLRVNP EIFICQQYME 
NERMAHKTLH HELIHAIDMC RTKMDPLHNC IHMACTEIRA ENLSGECSFF REIPRMEKLK
GHGAECVKRR AILSVRANPN CTARAGDYVN AAFDRCFADV YPFDRHPNQR