Gene PHATRDRAFT_12053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12053 
Symbol 
ID7200656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp729952 
End bp730461 
Gene Length510 bp 
Protein Length169 aa 
Translation table 
GC content43% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179701 
Protein GI219117827 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00023289 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAAAGAATAC CAAAACTCTA TTTGGTGATT ACTAATATTT CCAAGCGCCC AAATATTCGT 
GCCTTACTGG AACTTGCTGC TGCTTTTGGG TGTGACAAAG TCTTAGTGGT CGGACAGCAG
AAATTCGATA TTTCGCCAAA GGGCACAGAC ATTCCTCGAT CGATTCGAGA ACATGTAGAG
AGGGGTGGTC TACATATTGA GCGTTACTCT TCGTGGGAAG CATGTATCAA TTTTTTGTCT
TCGCACGGTA TTCGACTGGT TGGTGTTGAG ATCCATGTAG ATGCAAGACC TATCGAAGCC
TATCTAGATT ACAAGGATAC AGCCTTTTTG ATGGGAAACG AAGGGCAGGG TATCAATGAG
AAGCACATGA AATCGTGTGA TGCTTTTGTA ACTATACCAC AGTACGGTGG AGGAACGGCC
AGTCTGAATG TGTACGTTGC CGCCAGTATT GTTTTACATT CATTTCATCA ATGGCAGCAG
GGTGAGTTTT CCAAACACAA TTCTAGCTAG
 
Protein sequence
KRIPKLYLVI TNISKRPNIR ALLELAAAFG CDKVLVVGQQ KFDISPKGTD IPRSIREHVE 
RGGLHIERYS SWEACINFLS SHGIRLVGVE IHVDARPIEA YLDYKDTAFL MGNEGQGINE
KHMKSCDAFV TIPQYGGGTA SLNVYVAASI VLHSFHQWQQ GEFSKHNSS