Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12053 |
Symbol | |
ID | 7200656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 729952 |
End bp | 730461 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | |
GC content | 43% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179701 |
Protein GI | 219117827 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00023289 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AAAAGAATAC CAAAACTCTA TTTGGTGATT ACTAATATTT CCAAGCGCCC AAATATTCGT GCCTTACTGG AACTTGCTGC TGCTTTTGGG TGTGACAAAG TCTTAGTGGT CGGACAGCAG AAATTCGATA TTTCGCCAAA GGGCACAGAC ATTCCTCGAT CGATTCGAGA ACATGTAGAG AGGGGTGGTC TACATATTGA GCGTTACTCT TCGTGGGAAG CATGTATCAA TTTTTTGTCT TCGCACGGTA TTCGACTGGT TGGTGTTGAG ATCCATGTAG ATGCAAGACC TATCGAAGCC TATCTAGATT ACAAGGATAC AGCCTTTTTG ATGGGAAACG AAGGGCAGGG TATCAATGAG AAGCACATGA AATCGTGTGA TGCTTTTGTA ACTATACCAC AGTACGGTGG AGGAACGGCC AGTCTGAATG TGTACGTTGC CGCCAGTATT GTTTTACATT CATTTCATCA ATGGCAGCAG GGTGAGTTTT CCAAACACAA TTCTAGCTAG
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Protein sequence | KRIPKLYLVI TNISKRPNIR ALLELAAAFG CDKVLVVGQQ KFDISPKGTD IPRSIREHVE RGGLHIERYS SWEACINFLS SHGIRLVGVE IHVDARPIEA YLDYKDTAFL MGNEGQGINE KHMKSCDAFV TIPQYGGGTA SLNVYVAASI VLHSFHQWQQ GEFSKHNSS
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