Gene PHATRDRAFT_12044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12044 
Symbol 
ID7200677 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp140023 
End bp141123 
Gene Length1101 bp 
Protein Length266 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179588 
Protein GI219117591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CACGAACGTT CGGCACCGAA GATCTCCCGC AAAATGGTAC GCATGGGTGG CATTTACATC 
AAACTGGGTC AAATTCTATC CACAGTTGGT TCCGGATTTT TAAACGAAGC CTACGTCTCG
GCTCTACGCG TGCTTCAAGA TGGAGCCCCC GCTCGACCCT ATGCTGATAT TGTACATATT
GTGGAATCAT CGACCGGTCG AACGATGGAT GAAATGTTTG TAGACTTTGA ACCGACCCCG
ATTGGGGCCG CGAGTATCGG TCAAGCACAC CGCGCCACTT TGCGCCTACC CAATGGTGTC
GACGCGGGGA CAATATCTGA GCCCGTCATT GTCAAAGTAC AGTATCCCGA AGTAGCCCGC
TCGTTTCAAA TCGATTTCGA CAATCTAGCG GTTGTGACAC GCTGGTTCGA ACCCGAGCAA
GTAGATTTGG TGGAATCATT ACGCGCACGA CATAATCAAG AGCTAGATTT TCATCACGAA
GCTGATAATT TACGAACAGT CCGTCGGAAC CTGCAACGCT CTGGCGTTGA GCCGACACTC
GTCCGAATTC CGATGGTCCG TAACGAAACA GGCATCTGCA ATAATAACGT TCTCGTCATG
GAATACCTGG AAGGTACCAG TTTGGCTTCC GTCATTCAGC ACGAGCAAGA TCGGTTTGCA
CAAGCTCTAG GTAAGAGTGA CGGGAAAGAG CTTCAGCAAA TACTACTGGC TCGTATGAAG
GAACATTTCG AAAAGGGGGG CGGTACCGGT GAGGGCAGTC TGCTGGCCAT GGACTTTCCT
TTGCTGCAGA AGTTGGGACC TGGCGTCACT CGCTTGATTC GCTGGTACGG AAACGTCAGA
GAAACTGCTG GAGATTTCGC CTTTACACTA CGAACGGCTT CAGGAAAGAT GCGGAATGCT
TTCGGAGGAA CCGACAATTT CGTCGCGCTC AAGAATCCCA AGCGCACTAC GAAAGTCAAT
CTTGGCCGAG TTTTGAAAAC GCTCGTTCAT GTACACGGTC TTCAACTGAT GCAGGATGGC
GTGTTTAATG CTGACCCGCA TCCCGGTAAC GTACTTGTAT TGCCAGATGG TCGACTAGGT
CTATTGGATT ATGGCATGGT C
 
Protein sequence
HERSAPKISR KMVRMGGIYI KLGQILSTVG SGFLNEAYVS ALRVLQDGAP ARPYADIVHI 
VESSTGRTMD EMFVDFEPTP IGAASIGQAH RATLRLPNGV DAGTISEPVI VKVQYPEVAR
SFQIDFDNLA VVTRWFEPEQ VDLVESLRAR HNQELDFHHE ADNLRTVRRN LQRSGVEPTL
VRIPMVRNET GICNNNVLVM EYLEGTSLAS NPKRTTKVNL GRVLKTLVHV HGLQLMQDGV
FNADPHPGNV LVLPDGRLGL LDYGMV