Gene PHATRDRAFT_11956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11956 
SymbolUNC18 
ID7200411 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp822280 
End bp824204 
Gene Length1925 bp 
Protein Length588 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179924 
Protein GI219118292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGTTGGAAGG TCCTTATCCT GGACAATCAC GCTATGCGCG TGATATCTGC CGCGGTAGGC 
ATGTACGATA TCATGGAAAA ACGCATCACG TTGGTGGAGT CCCTCGACAA AAAGAGGGCA
CCATTTCCGG ACATGGGCGC CATTTACTTT CTGGATCCGA ACGCGGACAG CGTCGCCAAG
TTGGTAGCCG ACTGGAGCGA CCCTAGCAAC AAGAGATTGT ACGGCAGCGC CGTCTTTCTG
TACTTTTTGG GGCGCCTTCC CGATAATCTT TTAGCACAGA TCAAGATGTG CCGTCCGCTT
TTGAAGCGTG TCAAGGGACT GATGGAGATT AACGTGGACT TTTTGGCGGT TGAAGAGCGC
GCCTTTACGT TCGATATGCG GCATGCCTTT CCCTCATTTT ACCTACGTCG TGGCAATACC
CCGATCGAAC TTGACATCGC CGAGAAGCTG GTTACGGTAT GTGCGACGCT CAACGAGTAT
CCACACATTC GGTACAAGCA GTCGTCGGGT ATCTGCACCA GTCTTGCGTC CGTCTTTCAT
CTTAAAATGG ATGAGTATGT TTCACAGAAT CCGTCCTGGT GGTATCACGG CGGACCAGTC
AAGAACCAGG CTGCCAATCG CGAGCGTGGC ACGCTCCTGT TGTTGGACCG AGCTGACGAT
TGTTTGACAC CTTTGATGCA CGACTTTATT TATCAATCAA TGGTGCAAGA CTTGCTCAAA
ATGGATGGTG ATCGCATCAC GTTCCAGGCA GAAACTAAGA ACGATCCTTC TCGGACGGAG
GCCAAGGATG TTTTGTTGGA CGATCGTGAT TCTCTCTGGG TCGAGCTTCG CGGAAAGCAT
ATTGCCTCAG TTATTGAGAC GCTTTCTGGA CGCATTCGTG AAATCATGAA TTCTTCCACG
GGTAGCGCGT TTGGAGGCAA AAAACAACAG CAGGGTAACT TGAGTATTTC TCAAATGGCG
GCTGCCCTAA AGGCCTTGCC AGAGTATCGA GAAGTTATGT CAAAACTGTC TCAACACATG
CATATTTCCC ATGAGTGTAT GGAGGTTTTC AAACACAATG GCCTTTACAA CCTTAGCGAG
CTGGAGCAAA CCTTGGCAAC CGGGAAGGAT GAGGATGGAC GCACTCCCAA ATTGTCGGAC
ATCATGGAGC GGGTGGAACA GGAGCTGCTG AAAATGCGCG ACCCTAAAGC TCGGTTGCGA
TTAATTCTCA TTGCTACTGT TAGTCAAGGA GGTCTTCGCC AGCAGGATCG TCGACGCCTC
ATGGGCGCTG CAGAGCTTTC CCGCAAACAG ATTCGGACTT TGAATAGTTT GGAGATCCTG
GGTCTGTCTA TTTTTGCTTC GACTGAAAAG AACAGGTTGG TGTCCATGCT AGCAGGGTAC
GTCAAGAATA TATTTAAAGT TCGTGGCCGT GCATTTTTCT ACGTACTCTT ACAACTGTTT
GTCTACATAG AGGGCGTTTG TCATCTGGCA GTACCTCCGA TGACGAATCC GAATATGCTG
CCAGTCGCTA CGTCCCACCA CTGAAGCACA TTCTTTCCGA GTTAGTAAAC AATCGACTAA
GCTTCGAAGA TTATCCGAGT ATTCTTCCCA TGCCAGAGAG CAACCCCTCG CTGTCCACTC
CGAGCGCCCG TGGCAGCGTG AGATCTTCTC GTAGTAGTGG TGGCAGTAGC GCCCGAAAAT
CGGCCGGAGC CTCGTCACGA TGGGGGAAAA CCAGTACCAC AGAATCTCGT CCTTCTGGGG
CCATCAATCT TTCCGGAGGT CGGTCGATTG CGTTCATGAT GGGAGGAATG TCCTTTTCGG
AATTGAGAAT TGCTCGAGAC GTTATGGAAA AGGAAATGCG TGAAGTGATT GTTGGATCGA
CGGCTTTTAT CTCTGCAAAA GATTTTGTTG ATGATTTGGC ACTTTTGGGT AGAGATGAGG
AGTAA
 
Protein sequence
GWKVLILDNH AMRVISAAVG MYDIMEKRIT LVESLDKKRA PFPDMGAIYF LDPNADSVAK 
LVADWSDPSN KRLYGSAVFL YFLGRLPDNL LAQIKMCRPL LKRVKGLMEI NVDFLAVEER
AFTFDMRHAF PSFYLRRGNT PIELDIAEKL VTVCATLNEY PHIRYKQSSG ICTSLASVFH
LKMDEYVSQN PSWWYHGGPV KNQAANRERG TLLLLDRADD CLTPLMHDFI YQSMVQDLLK
MDGDRITFQA ETKNDPSRTE AKDVLLDDRD SLWVELRGKH IASVIETLSG RIREIMNSST
GSAFGGKKQQ QGNLSISQMA AALKALPEYR EVMSKLSQHM HISHECMEVF KHNGLYNLSE
LEQTLATGKD EDGRTPKLSD IMERVEQELL KMRDPKARLR LILIATVSQG GLRQQDRRRL
MGAAELSRKQ IRTLNSLEIL GLSIFASTEK NRLVGRLSSG STSDDESEYA ASRYVPPLKH
ILSELVNNRL SFEDYPSILP MPESNPSLST PSARGSVRSS RKSRPSGAIN LSGGRSIAFM
MGGMSFSELR IARDVMEKEM REVIVGSTAF ISAKDFVDDL ALLGRDEE