Gene PHATRDRAFT_11901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11901 
Symbol 
ID7200520 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp3730 
End bp4322 
Gene Length593 bp 
Protein Length168 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179770 
Protein GI219117971 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00737324 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGAACA AGATAAGCTT AGAGGAAGAG CTTGTAAACT TGCGGATTAC GAGCAAGCAA 
ATGCATCGGT CGTCCAAAAA ATGTGAGAAG AACGAAAAGG CAGCTTTGGA AAAGCTTAAA
AAGGTATGAC ACTGGAAATC TACCAGAAGT TCAATTCAAT CTGTAATCTT TATAAATCGC
AGGAACTCAC GCGTAGTCGA CTCTTCGAAC AGGCGATTCA ACAAGGAAAT TCGGAAGGAG
CTCGGATTTA CGGACAAGAT GCCATTCGCG AAAAGAACCA ATCTCTAAAT CATTTGCGGA
TGGCATCGCG CTTGGACGCT TGCTGTTCAC GAATCGAAAC AGCAGTCCGT ATGAATGCTG
TTTCGGATAG CATGAAAGGC GTGGTGAAAG GGATGGGCAG GTCCATGGCG AGTATGGATA
TTGAGAAACT CAGCTCCACG ATGGATAAAT TTGAGCAGCA GTTTGAAGAT CTTGATGTCA
AGACGCAGTA CATGGAGGGT GCTATGAATG CTACTACAGC GACATCGACA CCTGCGGAAC
AAGTCGACGA ACTTATTGGG CGAGTGGCGG ATGAAAATAA TCTCGAATTG GGA
 
Protein sequence
MGNKISLEEE LVNLRITSKQ MHRSSKKCEK NEKAALEKLK KAIQQGNSEG ARIYGQDAIR 
EKNQSLNHLR MASRLDACCS RIETAVRMNA VSDSMKGVVK GMGRSMASMD IEKLSSTMDK
FEQQFEDLDV KTQYMEGAMN ATTATSTPAE QVDELIGRVA DENNLELG