Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11901 |
Symbol | |
ID | 7200520 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 3730 |
End bp | 4322 |
Gene Length | 593 bp |
Protein Length | 168 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179770 |
Protein GI | 219117971 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00737324 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGAACA AGATAAGCTT AGAGGAAGAG CTTGTAAACT TGCGGATTAC GAGCAAGCAA ATGCATCGGT CGTCCAAAAA ATGTGAGAAG AACGAAAAGG CAGCTTTGGA AAAGCTTAAA AAGGTATGAC ACTGGAAATC TACCAGAAGT TCAATTCAAT CTGTAATCTT TATAAATCGC AGGAACTCAC GCGTAGTCGA CTCTTCGAAC AGGCGATTCA ACAAGGAAAT TCGGAAGGAG CTCGGATTTA CGGACAAGAT GCCATTCGCG AAAAGAACCA ATCTCTAAAT CATTTGCGGA TGGCATCGCG CTTGGACGCT TGCTGTTCAC GAATCGAAAC AGCAGTCCGT ATGAATGCTG TTTCGGATAG CATGAAAGGC GTGGTGAAAG GGATGGGCAG GTCCATGGCG AGTATGGATA TTGAGAAACT CAGCTCCACG ATGGATAAAT TTGAGCAGCA GTTTGAAGAT CTTGATGTCA AGACGCAGTA CATGGAGGGT GCTATGAATG CTACTACAGC GACATCGACA CCTGCGGAAC AAGTCGACGA ACTTATTGGG CGAGTGGCGG ATGAAAATAA TCTCGAATTG GGA
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Protein sequence | MGNKISLEEE LVNLRITSKQ MHRSSKKCEK NEKAALEKLK KAIQQGNSEG ARIYGQDAIR EKNQSLNHLR MASRLDACCS RIETAVRMNA VSDSMKGVVK GMGRSMASMD IEKLSSTMDK FEQQFEDLDV KTQYMEGAMN ATTATSTPAE QVDELIGRVA DENNLELG
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