Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45331 |
Symbol | |
ID | 7200027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | - |
Start bp | 866662 |
End bp | 867989 |
Gene Length | 1328 bp |
Protein Length | 340 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179524 |
Protein GI | 219117459 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0689578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TGCCATCGAA GCCACCACGA CCGAGAACCT ATCTGAACAT GGCGAGTACT GCCCTCATCG AAAATGGTGT CCTTGTCGAC GACAAGGACG GCAATCCCGA CAACGGCACG AAACTTTCGA GACCGACATC GGCCACCGCT CGGGCTTTTT TTGCGGCGCT GGACGCCCAA ACGGCACATT CGGTCAACCC CACATCCTTT CCCCTTTCGG CTAGTACTAG CAATATCACC CGCAACAAAG GTAGTACTAG AAACACGACT AGTGCTACCA ATACGAAACG ACAACCGAGT GAATGGATGC ACCAGCGTAT TCAGTCACTC GGTTGGCGCA ATCGCTATTC ACAGGATGAG GACTACCCAG TCACCATTGC CAATCAAATC GTAAAAGTAC GGCAAGTCCA GCGGGGGGAA GCGGAACAGA CGTACGGCAC CGGTGCTACC GTTTGGCCCG CTGCCATGGT CCTCCTCAAG TACCTCGAGC GACATTCCGT TACACTCCGG GGTCGCACCG TCGTCGATCT CGGCGCCGGT ACGGGCGTCA CCAGCATTGC GGCAGCCTTT CTGGGCGCGA AGCGGGTACT CTGTACCGAC GGCGAACCCA CTGTGGTTCA ATTGGCCCGT GAGAACATTG TCCGTACCGC TGAGTCGTTG TCGGTTTTAA ACACTACCAC AACAGCAATA ACCGTCACGA CGACCGACCC AATGAACGTC AGTGTCATTC AAGGCTGCCC CGTGCACACC CAACACTATT GGTGGGGCAC GGGTAGCATT CCAGACGACT GGGAGGTTGA TGTAGTACTC GTGGCGGACT GTGTACTCCC CAAGCTCTAT CCGATTGCAC CCTTGGTCCA AGCCATCGAC CAACTTCTGG TCAAACCCAA CACGGAAGCT ATCCTCTCGT ATGAACACCG CTACTATCCC GACTACGATC CACGGGACGA GTTTCGCACT CTGGCGGCGG CGCGGCATTT GGATGTACTG GTAGTGCCTT TGACAGAACA CGATCCCGTC TATGCGGTCG ACGACATTGA GATATGGCGA GTCCGCCGGA AAACGTCGTA AGTTCCGTCG CTTTCGCCAC CATCACGAAT TACACCAACG ACACATGCGC TTCCGGCCTA GCAATTTCGT AGACCACTGG GCCCGAACAA TGTTCGAGTT AGAGAGTGAG AGACTCGAGA CTAAGGGTTC GGCTACGAAC ACACATTGGG AGTCGACTGG TTCCATCGTG AACACACCGA CTTCGTCTAG TATCGTGTGG TACTTGGCAG TATGGATAGA AACTGCAGAT TCGATTCCGT TCTGGACAAA CAGGTTCATC TCTCGTCT
|
Protein sequence | MASTALIENG VLVDDKDGNP DNGTKLSRPT SATARAFFAA LDAQTAHSVN PTSFPLSAST SNITRNKGST RNTTSATNTK RQPSEWMHQR IQSLGWRNRY SQDEDYPVTI ANQIVKVRQV QRGEAEQTYG TGATVWPAAM VLLKYLERHS VTLRGRTVVD LGAGTGVTSI AAAFLGAKRV LCTDGEPTVV QLARENIVRT AESLSVLNTT TTAITVTTTD PMNVSVIQGC PVHTQHYWWG TGSIPDDWEV DVVLVADCVL PKLYPIAPLV QAIDQLLVKP NTEAILSYEH RYYPDYDPRD EFRTLAAARH LDVLVVPLTE HDPVYAVDDI EIWRVRRKTS
|
| |