Gene PHATRDRAFT_45331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45331 
Symbol 
ID7200027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp866662 
End bp867989 
Gene Length1328 bp 
Protein Length340 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179524 
Protein GI219117459 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0689578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGCCATCGAA GCCACCACGA CCGAGAACCT ATCTGAACAT GGCGAGTACT GCCCTCATCG 
AAAATGGTGT CCTTGTCGAC GACAAGGACG GCAATCCCGA CAACGGCACG AAACTTTCGA
GACCGACATC GGCCACCGCT CGGGCTTTTT TTGCGGCGCT GGACGCCCAA ACGGCACATT
CGGTCAACCC CACATCCTTT CCCCTTTCGG CTAGTACTAG CAATATCACC CGCAACAAAG
GTAGTACTAG AAACACGACT AGTGCTACCA ATACGAAACG ACAACCGAGT GAATGGATGC
ACCAGCGTAT TCAGTCACTC GGTTGGCGCA ATCGCTATTC ACAGGATGAG GACTACCCAG
TCACCATTGC CAATCAAATC GTAAAAGTAC GGCAAGTCCA GCGGGGGGAA GCGGAACAGA
CGTACGGCAC CGGTGCTACC GTTTGGCCCG CTGCCATGGT CCTCCTCAAG TACCTCGAGC
GACATTCCGT TACACTCCGG GGTCGCACCG TCGTCGATCT CGGCGCCGGT ACGGGCGTCA
CCAGCATTGC GGCAGCCTTT CTGGGCGCGA AGCGGGTACT CTGTACCGAC GGCGAACCCA
CTGTGGTTCA ATTGGCCCGT GAGAACATTG TCCGTACCGC TGAGTCGTTG TCGGTTTTAA
ACACTACCAC AACAGCAATA ACCGTCACGA CGACCGACCC AATGAACGTC AGTGTCATTC
AAGGCTGCCC CGTGCACACC CAACACTATT GGTGGGGCAC GGGTAGCATT CCAGACGACT
GGGAGGTTGA TGTAGTACTC GTGGCGGACT GTGTACTCCC CAAGCTCTAT CCGATTGCAC
CCTTGGTCCA AGCCATCGAC CAACTTCTGG TCAAACCCAA CACGGAAGCT ATCCTCTCGT
ATGAACACCG CTACTATCCC GACTACGATC CACGGGACGA GTTTCGCACT CTGGCGGCGG
CGCGGCATTT GGATGTACTG GTAGTGCCTT TGACAGAACA CGATCCCGTC TATGCGGTCG
ACGACATTGA GATATGGCGA GTCCGCCGGA AAACGTCGTA AGTTCCGTCG CTTTCGCCAC
CATCACGAAT TACACCAACG ACACATGCGC TTCCGGCCTA GCAATTTCGT AGACCACTGG
GCCCGAACAA TGTTCGAGTT AGAGAGTGAG AGACTCGAGA CTAAGGGTTC GGCTACGAAC
ACACATTGGG AGTCGACTGG TTCCATCGTG AACACACCGA CTTCGTCTAG TATCGTGTGG
TACTTGGCAG TATGGATAGA AACTGCAGAT TCGATTCCGT TCTGGACAAA CAGGTTCATC
TCTCGTCT
 
Protein sequence
MASTALIENG VLVDDKDGNP DNGTKLSRPT SATARAFFAA LDAQTAHSVN PTSFPLSAST 
SNITRNKGST RNTTSATNTK RQPSEWMHQR IQSLGWRNRY SQDEDYPVTI ANQIVKVRQV
QRGEAEQTYG TGATVWPAAM VLLKYLERHS VTLRGRTVVD LGAGTGVTSI AAAFLGAKRV
LCTDGEPTVV QLARENIVRT AESLSVLNTT TTAITVTTTD PMNVSVIQGC PVHTQHYWWG
TGSIPDDWEV DVVLVADCVL PKLYPIAPLV QAIDQLLVKP NTEAILSYEH RYYPDYDPRD
EFRTLAAARH LDVLVVPLTE HDPVYAVDDI EIWRVRRKTS