| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45243 |
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| Symbol | CRTISO4 |
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| ID | 7200259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011674 |
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| Strand | + |
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| Start bp | 585988 |
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| End bp | 587784 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | carotenoid isomerase |
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| Protein accession | XP_002179244 |
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| Protein GI | 219116899 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0755538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTTT CGGAAAGATC ACTAATTGCG TGTGCAATCT GCTCCATTTC GAGTGCTTTC
GTACCCATCA TCCACACGCC CCAGCATCAA TCGCCACGTA CAACCCGTCA TCAATTCACC
AGGATCTATG CGGCGGTGTC CTCCGTACCA TCCAATAGCA TTCCCGACGA AGCGGATGTG
GTTGTTATTG GATCGGGACT CGCAGGACTC TCCTGTGCCG CACTTTTAGC CCATTGTGGC
AAACGAGTGG TGGTGTTGGA ATCGCATGAT GCGCCCGGTG GTGCCGCGCA CGGCTGGGAA
CGCCGTGGGT TTCACTTTGA ATCCGGACCG TCTCTCTATT CCGGATTCGC CATGGAACGT
TCTCCAAATC CTCTCAAAAA TATCTTTCAA ATCACGGGAG AAGACTGCGA GTGGATTACC
TACGATCGGT GGGGTACCGT AATGCCGGAT GGGACCAAGT TTGCCGCCAA AATTGGACCC
GAAGAGTTTC AAGACGTATT GGAGAGCCAA GGAGGACCGG GAGCACGCGA AGAATTTGCG
GCACTAATGG AGCGCATGAA GCCTCTGTCC GATGCTGCTC AAGCCTTGAC ATCGCTCGCT
CTGCGGGAAG ATCCAGCCGT TGTCGTTACG CTTCTGAAGT ATCCCCGCGA CCTTATTGCA
ACTCTGGCAC AAGGACAAGC ACTGAACGAA CCATTCAAAA ACATCATGGA TGAAATGAAG
ATCGAAAATA AGTTTGTCAA AAACTGGCTA GATATGCTTT GCTTTCTCTT GCAAGGCTTG
CCCGCTTCGG ACACAATGAA TGCGGTCATG GCCTATATGC TCGCCGATTG GTATCGACCT
GGTGTCACTC TGGACTTTCC CAAAGGCGGA TCCAGTTCTA TTGTCAGTGC TTTGGTTCGT
GCCGTCCAAA AGAATGGGTC TTCCGTTTGC GTCAACAGTC ACGTGGATGA GATTCTGGTT
GAAAATGGTA AGACTGTTGG AGTCCGACTG ACCGATGGAC GCAAGGTGCA CGCCACACAA
GCCGTTGTAT CCAATGCAGA TCCGTACATC AGCAACAAAC TGCTCTTAAA CGCAAGAAAG
TCAGGTCAGC TCAATAAAGC TGCGACCGAT CATCTGGACG CTTTAATAAA CACCGACAAA
ACAGAGGGTG GTATTGCCGA TTTGAAATCT TTCATCCACA TTCATGCCGG CATTGATGCA
GCTGGCCTCC CCGATCAGCC CAGTGCCGAC TTTCCTGCAC AATGGGCCGT TGTCCGTGAC
TGGGATGCCC CTGAAGGAGT AGAGAGCCCG CGCAACATCG TTTTGTGCTC CATGCCTTCG
CTTATTGATC CTAGTCTTGC CCCTGAAGGC AAGCACGTCT TACATGCTTA CGTTCCTGCC
ACGGAGCCAT ACGCGGATTG GGCCGGCATG GACCGCAAGT CGGAAGAATA CACGAAAAAG
AAGGAGCAAG CTGCGGATTT TTTGTGGAGT GCCATTGAAG AGTACATTCC GAACGCTCGG
GATCGTGCTG TTCCTGGCAC GGTACAGATT GGAACACCCT TGACCCACGA ACGATTTTTA
CGACGGACAA GGGGTACCTA CGGTCCGCGT GTGGAAGTCG GTGCTGGACA GACTCTGCCC
GGTCACAAGA CTCCGTTGCC AGGTTTCTAC ATGGTAGGAG ACTTCACATT TCCAGGTATT
GGAGTACCCG CAACAGCAGC ATCCGGCGCC ATTGCGGCGA ACACGCTAGT GTCGGTGTTT
GATCATCTCG CAATGCTCGA TAAGGTCCGT CTCCCGGAAA AGGAACAAAA GTCTTGA
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| Protein sequence | MRFSERSLIA CAICSISSAF VPIIHTPQHQ SPRTTRHQFT RIYAAVSSVP SNSIPDEADV
VVIGSGLAGL SCAALLAHCG KRVVVLESHD APGGAAHGWE RRGFHFESGP SLYSGFAMER
SPNPLKNIFQ ITGEDCEWIT YDRWGTVMPD GTKFAAKIGP EEFQDVLESQ GGPGAREEFA
ALMERMKPLS DAAQALTSLA LREDPAVVVT LLKYPRDLIA TLAQGQALNE PFKNIMDEMK
IENKFVKNWL DMLCFLLQGL PASDTMNAVM AYMLADWYRP GVTLDFPKGG SSSIVSALVR
AVQKNGSSVC VNSHVDEILV ENGKTVGVRL TDGRKVHATQ AVVSNADPYI SNKLLLNARK
SGQLNKAATD HLDALINTDK TEGGIADLKS FIHIHAGIDA AGLPDQPSAD FPAQWAVVRD
WDAPEGVESP RNIVLCSMPS LIDPSLAPEG KHVLHAYVPA TEPYADWAGM DRKSEEYTKK
KEQAADFLWS AIEEYIPNAR DRAVPGTVQI GTPLTHERFL RRTRGTYGPR VEVGAGQTLP
GHKTPLPGFY MVGDFTFPGI GVPATAASGA IAANTLVSVF DHLAMLDKVR LPEKEQKS
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