| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45190 |
|---|
| Symbol | |
|---|
| ID | 7200227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011674 |
|---|
| Strand | + |
|---|
| Start bp | 445497 |
|---|
| End bp | 446639 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179214 |
|---|
| Protein GI | 219116839 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTACTC GGTATCGATC CCTCAATAAG CCGTTCCATT CTTTCCCTTC TGTAACTTTG
CGCACGCTCT TGGTTTCGCT AGCGATAATT TTCTTCGTTA CTCTTCGGTC AACGACAGCT
TTTGCACCCG CACCCTCTTT GCTTGTTGCC GGACAAACAA CGCCGTTATC CACGTCGCCA
ATACGGTCTT GGAGAAGCCT CTACGCTCGT GTCAATGGAG ACTCGTCGCT TCAAGAGCCA
CTCCCGTTCG TAATCGAAAG TATACCACTT GATCAAAACG AACGCGTCTA CACAGAAATT
TCTGAAGTCT GTATTCAGGC CTTTTTCAAC GATGGTGAGC AGCACCGGAA GATTCCTCCC
TGGAAGGCAT GGCAACTGGG ATACCTACGT CAGTTGCAAC AGTCTGATCT TAAAGTGCGG
CGGAGAAAAT ACCCAGATAC CAATTTCATG CTCGTTGCCC GGCGTGTGTA CCCCATCTCG
GAGATGCCTG GCGCCGTACG ACACACGCCA CTCATCCTCG ATGTATCGCA AGTTCTGAAT
TTGCAACCGC AACCGGAGGA AGACTACGTG CGTGGAGAAA TACTAGGATT TGTTGAAGTC
ACCAAAAAAC CTTACGGACT GGGGAGCGAA AAGGTTGGCT TTGACGACGA ATCGCGGATC
AAATTGCGTA AAATGAGCTT TTACGAGTCG CGCCCCGTCC TGACGAACCT CAGTGTCCGG
TACGAAGCCC GCCAATCTGG CGTCGGCTCG AAACTCGTGC AAGCTTGTGA AGACCGAGTT
TTAAAAGACT GGGGCATGAA GGAAATGATA CTGGAAGTGG AGGACGACAA CGACAATGCT
CGCAATTTTT ATCTAAAACG TGGCTACAAG GTATTGTTTG AAGACCCGGC ATCGAGGCGA
TACGATACGA CCGGTGTGTG GCTCAAGCAG GTACGATGCA AACGTCAAAT TATGCGCAAA
GCTTTGGGTG CCGTGGAACT GGTCGCACTG AATGCCTTCG AAGTAAAGAA CAGTGTAAAC
AAACTGTTCG GTATCAAAAT CCTTCAGCGG CTACGAGACA ATGTTCTCGG AACAATCAAG
GAACGTGTAC GCTAGTGTGA CTACAACATC GCTAATAAAA CAATCTGAAC CTTTTCATCT
TTG
|
|---|
| Protein sequence | MITRYRSLNK PFHSFPSVTL RTLLVSLAII FFVTLRSTTA FAPAPSLLVA GQTTPLSTSP
IRSWRSLYAR VNGDSSLQEP LPFVIESIPL DQNERVYTEI SEVCIQAFFN DGEQHRKIPP
WKAWQLGYLR QLQQSDLKVR RRKYPDTNFM LVARRVYPIS EMPGAVRHTP LILDVSQVLN
LQPQPEEDYV RGEILGFVEV TKKPYGLGSE KVGFDDESRI KLRKMSFYES RPVLTNLSVR
YEARQSGVGS KLVQACEDRV LKDWGMKEMI LEVEDDNDNA RNFYLKRGYK VLFEDPASRR
YDTTGVWLKQ VRCKRQIMRK ALGAVELVAL NAFEVKNSVN KLFGIKILQR LRDNVLGTIK
ERVR
|
|---|
| |