Gene PHATRDRAFT_34708 details

Gene Information

• Locus tag: PHATRDRAFT_34708
• ID: 7200178
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: +
• Start bp: 195273
• End bp: 195962
• Gene Length: 690 bp
• Protein Length: 229 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002179152
• Protein GI: 219116715

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0219194
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTATGC CACTGCCGGT AGCGGCTCCG CTTCCCACTA CCCGAGAGTT GGCCGCCCGT 
GCGATCCTCT CCACCAGTGC TCTCGTAAGT CAAGTCCCCG TCCATCCAGC AGTCTCCGTG 
ACACAGCCGC AACAAAAAGA AGAGCCACTC CCAGTAACCC AACTGAAGGC TATTTTCGCA 
CGATCCGAAA CTGGTCAGAA GATCTTGCAA AGACCGAACC GATGCATGTT CAGTAAACCC 
AGTCCCGAAG CCACGGACGC CTACGATTTG GAAGTCGTCA AGGCAATACG GAACAACGAA 
ATCGAGAAAC TGCGTGCACT CCAAAGAAAT GGAAAAAGCC TAGATGCTTG CAATCGATTC 
GGCGAGTCCC TCATCCATAT GGCCTGTCGA CGGAGTGATT TGGGCATGGT CAAGTTTTTA 
GTCGAAGAAG CCGGAGTCCG AGTGGACGTC CGGGACGACT TTGGCCGGCT CCCACTCCAC 
GATGCCTGTT GGACAACGTT GCCAAATTTT GCAGTTATGG ACGTGTTGAT CAAAGCTAGT 
TCACCTGCGC TACTCCTTTC GGAAGATGTA CGAGGGCACA CACCTTATCA CTACGCTAGG 
CGAGAGCACT GGACCGACTG GGTTCAGTTC CTGAATGACA GGGATCAGCT TATTACCCAG 
AGACTATGTG CCGCCAAAAT TTTGGGGTAA 

 

Protein sequence

MIMPLPVAAP LPTTRELAAR AILSTSALVS QVPVHPAVSV TQPQQKEEPL PVTQLKAIFA 
RSETGQKILQ RPNRCMFSKP SPEATDAYDL EVVKAIRNNE IEKLRALQRN GKSLDACNRF 
GESLIHMACR RSDLGMVKFL VEEAGVRVDV RDDFGRLPLH DACWTTLPNF AVMDVLIKAS 
SPALLLSEDV RGHTPYHYAR REHWTDWVQF LNDRDQLITQ RLCAAKILG