| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_34650 |
|---|
| Symbol | |
|---|
| ID | 7200066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011674 |
|---|
| Strand | + |
|---|
| Start bp | 49622 |
|---|
| End bp | 50784 |
|---|
| Gene Length | 1163 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179128 |
|---|
| Protein GI | 219116667 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACCAC GCTCGGGTCG TCAATGCTGT ACAGTGTCAT GTGCGGGTGT CCCCAAAGTG
CGTCCTCGGC TCGTTTCCCC CAGGGTGTAT GGCCGTCGGT CGGTACACCC GCGCAACCTA
GTTCCGACAC GGCCCTACCA TGACGATGCC CTCCAATGGG CAGCGAAACA TCGAGAAGCG
GCACAAGCCT GCCTTGAGAT ACCACCACTC AAACAACACG ATGACTACCT GGTCCGTCAG
TGTGCTACCT GGAGCGACTA TATGCGTTTG CGAGGATGGG ATCACGACAA AACGCTCCAA
CGTTTCGGAT TTCGAAGCGA CTCCGAAAGG AGTCGGACCC GATCCTTTGC ACAAGCCCTT
GTCAGTCACG TCCTTTCTGC TCCCCTTACC TTACGGTACA ATTTGCCATG GTTGTCAGTA
GAACCGCAAC TGGCAATTGG AGATATTACC CGGGAGCGAT ACTATCGGAG GATTTGTTGT
GTCGGCGCCC GAGCCGAAGC TACCTTGCCC TTGGAATATT GGAAAGAATG GCTCATTCTC
GAAAGACAGC ATTTTGCAAG AGAGCAGAAA ACCCATAAGA TTTCCTCACC ATCTCTTGTC
AACTCTAAGC TGCAGTTGAC GATTGATTTT CTTGGACCAG ATTGTATCCC AAGGCCGTCG
CACGTGTTGT CCTACGAGGA ATCTACCTTG ACTCTGCAAT GGCTCTGGAA TCTACCTTGA
CTCTGCAATG GCTCTCGAAT CAAACCTTCC ACGAGTACGT GGCGCAAATA CACGGTTTAT
ATCCGGAAAT GTTGCCATCG CGGTCACTAT CGCCAGTGTC ACTATTGCCT TGGGATGCCT
ATGCATTGTT CAATCCAGGA CTCGGGCATC ATCATTTAAA ACAAAGTTGG CAACCTACTT
TGCAATTACT GGCTAGCGAA CTCCAGCAAC ATTCCAAGCC GATCCTTTGT ACGGCACATT
CGAGTCTCGA TGCTGAACGT GACGAGAAAG AGCTACGACG CGTGATCGTT GGCGGCGGTC
ACCAGCCTGA CGGCTTTCTG TTGGAATACC AAAAGAATGC CTGGGCGAGC CAAATTTCGT
ATCAGGATCC CTTCGATCGA AATCATGTAG TCCATCCTAA TGCATTTGCT GCTAGACTAT
ACGCTGCCGG GGATAGAGAC TAG
|
|---|
| Protein sequence | MSPRSGRQCC TVSCAGVPKV RPRLVSPRVY GRRSVHPRNL VPTRPYHDDA LQWAAKHREA
AQACLEIPPL KQHDDYLVRQ CATWSDYMRL RGWDHDKTLQ RFGFRSDSER SRTRSFAQAL
VSHVLSAPLT LRYNLPWLSV EPQLAIGDIT RERYYRRICC VGARAEATLP LEYWKEWLIL
ERQHFAREQK THKISSPSLV NSKLQLYPKA VARVVLRGIY LDSAMALEST LTLQWLSNQT
FHEYVAQIHG LYPEMLPSRS LSPVSLLPWD AYALFNPGLG HHHLKQSWQP TLQLLASELQ
QHSKPILCTA HSSLDAERDE KELRRVIVGG GHQPDGFLLE YQKNAWASQI SYQDPFDRNH
VVHPNAFAAR LYAAGDRD
|
|---|
| |