Gene PHATRDRAFT_34640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_34640 
Symbol 
ID7199920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp30186 
End bp31376 
Gene Length1191 bp 
Protein Length396 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179123 
Protein GI219116657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.869875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTT TCAGCTTTTT CCTTCTGTCG TTCCACACGA TCATCGCACT CGCTAAGAAG 
CGAGGAAAGC CCGTCAAAGT TTTTATTCTG GCTGGTGAAG CTAATGTCGA AGGCTACGCA
TCACTGTCAC ATTTGCACGA TTTGGTCACT GGGCAACACA CCCTTAATGT GACGGAAACG
CGTCTCGATG GTCCTGGACG TTACCAGCAC TTAAGAGATG GCTATGGGCA GTGGTCCACA
CGAGACGATG TTTTTGTCAC GTATGAGCAC GAACGGCACT CTGGCTGGAA ATATGGTCCC
TTGGATGTAA CCCATTGGGG CGCCGCTCCA AATGTCTTCG GTCCCGAGGT TGAGTTTGGA
CATGTTATGG GAAATGCCTA CGTTGAGCCA GTCATTTTGG TCAAAGCTGC TTGGGGGAAA
CGGTCGTTGG CGAAAGATTT CCGACCGCCG TCAGCAACTG GTGAAACTGG ATTTCAGTGG
TACCGTATGC AAACCGGTAT AGCCAACACC TTTGCCCAGA TAGCCAACAT ACTTGGTGAG
GAGTACAAAC ACGCGGATAT TGATATTGGT GGAATAGTCT GGTGGCATGG GTATACAGAT
TTGTGGAATC AGGCAAACGC AGCTGAATAT GAGTCAAATC TCGAACACTT CGTACGTGAC
TTAAGATCAA CCCTACATCG CCCGCTCCTA CCGATAGTGA TCGCAGAATT AGGTGGATCT
GGAGCGAATG CATCCCGCCG AGAGATTCGT ATGCGCGATG CACAGCAACG CGTGGCAAAT
CTTGCCGAAT GGAACTATAC AACGTCGTAC GTGCGGACGG CTTCATTTGC TGTACCGTCG
AAGCCTTTCC TAGACATCAA TACACATTAC TATGGCCGTG CCGATACAAT GATCGCAATA
GGATCAGCCC TTGCCACCGA GATGCTACGG CTCAACCATC TGGGGCCTCC AGAGTTCCGC
AAATCGCAAC TGGAATCAGA TTTGTCTACG TTTGGTGGAT TCTTGCAAAC CTTTTTTACA
ACTTGTATAG CTGTCGTGGC AGCAGTATTG ATTGTGTTAT ACAGTCTGTA CAAAAATGGT
CACATCTCCA GAGGCAAGGT CATGCGACTT CGCAACAGCT TTCATTGTCG AAAACGAGAT
AATGGTACAG TTTTCGCAAA CGGTCCCATC CGAGAAACGA CAATGGCATA A
 
Protein sequence
MKFFSFFLLS FHTIIALAKK RGKPVKVFIL AGEANVEGYA SLSHLHDLVT GQHTLNVTET 
RLDGPGRYQH LRDGYGQWST RDDVFVTYEH ERHSGWKYGP LDVTHWGAAP NVFGPEVEFG
HVMGNAYVEP VILVKAAWGK RSLAKDFRPP SATGETGFQW YRMQTGIANT FAQIANILGE
EYKHADIDIG GIVWWHGYTD LWNQANAAEY ESNLEHFVRD LRSTLHRPLL PIVIAELGGS
GANASRREIR MRDAQQRVAN LAEWNYTTSY VRTASFAVPS KPFLDINTHY YGRADTMIAI
GSALATEMLR LNHLGPPEFR KSQLESDLST FGGFLQTFFT TCIAVVAAVL IVLYSLYKNG
HISRGKVMRL RNSFHCRKRD NGTVFANGPI RETTMA