Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_26925 |
Symbol | CDKC2 |
ID | 7199968 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | + |
Start bp | 853095 |
End bp | 854986 |
Gene Length | 1892 bp |
Protein Length | 461 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179306 |
Protein GI | 219117023 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCAAATTACT GTTCCGTTTG CCGAACAAGC TCGAAGAGTT CCTGTTGTTT AGATCGCTAG AAGCGATTGT GGGGTTCTCA TAATCTCGTC GCTTTCAACC ACGGAGCCCC CTAGTGGCCC GTCATCTCAG CGAGCCATGG CGAGTGTGTC GACTATGGTA CGCCCTCCCC CTAGACGCCC CGGGCCGCCC GGACCTCCGC CACCAAGCGG CCGCCCTAAG CCACCCCCAC CACCCCCCAA ATCGGCTCCA CCGCCGCCAC CACTACCCCC CAAATCCAAC GGACCTCCTC CTCCGGCGCC ACCCAATGTG CCTCCGACCC CGCTCAGTAA ACGCCCCGCT GACTCGGTGG ATGCACCGAT TGCGAAGCGC GCTCGCGCTG GTTCCGTGGG TCAACTTTCC ATTCGAGCTC CCGTGGTCCT CCGTGACGTT AATGTTTTTA CCAAGAAACA TCAAGTCGGA CAGGGGACCT ACGGCAGTGT TTTTGTGGGC CAAGACAAGG TCACTAACGA AATTGTGGCT CTGAAACGGA TCAACACGAA ACAGGAGGAG AACGGTTTCC CCATTACGGC TCTTCGCGAA GTCAAAATCC TCAAGGTTTT GACGCATCCC AATATTGTGA CGCTCAAGGA AATCGTGACA TCCAAAGGTG CGTTTTCATT TGCGGAAGAA AGACCTGGGC TTTCGTCTCG TTGGTGGATG GCTTTGGCGG ATCTCATTTT CGCGCGTCGT TCCACTCGAC ACGAACGGAC GCGCAGTTCA AACCGCCGAC AGCAGTGCAA GCTTTCTATC ACGAGGTCGC GCTCGTCCAT GGGTGCCTCG CATATAAGCC TGCAACAATC GTACCGTCCT TGTGGGAAGA CGTTCGTTTT GGTGTACTGA CACTTGTCTC GTCGATCTTT TGTGTTCCGC GTAACACAGA GCAAGGCGAA ATCCCCAAAA ACGTCTTTAT GGTCTTTGAA TACCTCGAGT ATGATTTGAC CGGCGTACTG GAGACCTCCG AGATTCGCTT GACGCAGGAT CACGTCAAAT CTTGGTCTCA GCAGCTTCTT GGTGGTGTAC ATTACATGCA CACCAACAAG GTCATCCACC GCGATTTGAA GGCTTCCAAC TTGCTGATCA ACCGCCAAGG CGAACTCAAA ATTGCCGATT GGGGTTTGGC CCGTAGCTGG AACAGCGAAA TGAAGCGATT GACGAATAAG GTGATTACTT TGTGGTATCG TCCTCCAGAA CTCTTACTCG GATGCTTGGA GTATACCGAC AAGATAGATA TGTGGAGTGT CGGTTGCATC ATTGCCGAAA TGTTCCGTCG TTCCGGCTTC CTCAAGGGCA GCAACGAAGC CACTCAGTTG GATTTAATAT TTCGTACTTG CGGCCATCCC ACGAAGGAAG AGTGGCCGTC TCTAGGAGAC AAGTGTCGTC TCTGGAAGAA GCTTGGTCCC AATGCGGGTC AGCCTCGATT CCCGAATCGG TTGGCGGAAG CTCTCCGAGC GAAACTTCCG AATCCCAAGT GGATGACCGA CAATGCGATT GAGCTTATTG CCAAGCTGAT GGCGTTGAAC CCTGACCACC GCTGGTCGGC CGAACAGGCG TTGGATGCCG AGTACTTTTT CGAGAATCCG ATCGTCAAGC CGGCGAACAA ACTGGTGATG AATTTCGCCG TCCACAGTGT ACACGAGTGG GATTGCCGCC GCAAGTTTGA ACAAAAAATG GCTCAACAGC GCCAGGCCCA ACAACAAACC AATGGGGTGC ACAAGTAAAT ATACACCGTC AGCAATTGTG TTGGAAGTAG GACGAAGACT CACGAAAGTG AGACGACACA TTGATCGATC TACACCCCCT ATTTACCCTT TCTACCTATC CAAAAACCTA TAAAAATTTC CATCTACATG TA
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Protein sequence | MASVSTMVRP PPRRPGPPGP PPPSGRPKPP PPPPKSAPPP PPLPPKSNGP PPPAPPNVPP TPLSKRPADS VDAPIAKRAR AGSVGQLSIR APVVLRDVNV FTKKHQVGQG TYGSVFVGQD KVTNEIVALK RINTKQEENG FPITALREVK ILKVLTHPNI VTLKEIVTSK GAFSFAEERP GLSSREIPKN VFMVFEYLEY DLTGVLETSE IRLTQDHVKS WSQQLLGGVH YMHTNKVIHR DLKASNLLIN RQGELKIADW GLARSWNSEM KRLTNKVITL WYRPPELLLG CLEYTDKIDM WSVGCIIAEM FRRSGFLKGS NEATQLDLIF RTCGHPTKEE WPSLGDKCRL WKKLGPNAGQ PRFPNRLAEA LRAKLPNPKW MTDNAIELIA KLMALNPDHR WSAEQALDAE YFFENPIVKP ANKLVMNFAV HSVHEWDCRR KFEQKMAQQR QAQQQTNGVH K
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