Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_26807 |
Symbol | |
ID | 7200226 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | + |
Start bp | 442062 |
End bp | 443357 |
Gene Length | 1296 bp |
Protein Length | 331 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179213 |
Protein GI | 219116837 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGGATATCGT AAAAACCGCA CCTTCTTACT CCCGACTTTG TAGCCGTCTC CCCTAACATA CTTGCTAGCT CAAGGAATGG CTTGGACCTT TTTTGCAGCT GTCATAATTT TTCTTAAAAG AAATGTTGAG TCGGAGCTAT GCCCAGGGTC TTGTCTTCAT CGTGCTCGTG GCACTAATCT GGGCTGCGTC GTCGGTGTTA GTGCAGTATC TTTACACTGA GCAGTCATTC GAATCCCCCT TTTTGTTGAC ATACATTGGT GTTTCCCTAT TTACTTTGTG GCTACCGACG CGGTTGCTGA CCGAGTGGGT CGAACACCGT TTTCGAAAAG TTGCGAATGA CGTGTCGCCT GAGGTTGATC GCATCACACC GTATCAGAAT ATTCCCAACC CACGCTCTGA TTTGTACGAA GATGATCTTT CATCAGATGA AATTTTAGAA GAGGAAGATG CTGATGTTGT ATACACCGAT CACCGATTTT CACCTTGGAC GCACGGAGAC CATTTGAAAG CAGCAGCAAA GATCGCACCT GTGTGGTTTG TTGCCAACTG GTCCTACAAT GCTTCGTTGG CATATACGTC CATCACCTCC TCAACGGTGC TGGCAGCTAC GGGTAGCATT TTTACCTTTA TATTTGCCCT GCTGTTAAAG GATGAACAAT TTGCTTGGAT GAAACTGGCT GGAGTTTTGC TGGGGGTATC AGGAAGCTGT TTGACAGCCC TCCACGATTC ATCATCTAAA AGTAGCAGCG ATAGTGATGC GGTTAGGAAC TTGGAGCTTT TCGGCGATTT TCTTGGGCTC ATCTCCGCTG TTGGCTACGG AGCGTATGCC GTACAGACTC GAGTATTATG TCCGCGAGAT GAGGCTTTGT ACAGTATGCA GCTACTTTTG GGCTACATCG GACTGATCGA TTTGATTGTT CTGTCCCCTA TCGCCATTTA TCAAAGCATT ACAAGCGTGC AAATACCATT GTTTGTGTTT CTATTTGTTG TTTTGAAGGT ACGCTGCCTT TGTAGGAAAC TAAGCAGATT TGTTCAATTT CTTTAACCAA TTCGTTACAT TGCTTCAACG GCACCAGGGG CTCTTGGACA ACGTTATATC GGACTACATG TGGTTAAGAG CAGTGATACT GACTAACGCT ACAGTCGCCA CGGTTGGCTT GGGTTTGACG ATTCCCCTGG CTTTTGCGAG CGACATCATT CTAGGAAAGT CGGATGTTTT GTCCACCGGT TCGGTTCTTG GCGCTTTGAT TGTTTTGCTA GGATTCGTTT TCGTCAACAT TGGGGCAACA TCGATT
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Protein sequence | MLSRSYAQGL VFIVLVALIW AASSVLVQYL YTEQSFESPF LLTYIGVSLF TLWLPTRLLT EWVEHRFRKV ANDVSPEEDA DVVYTDHRFS PWTHGDHLKA AAKIAPVWFV ANWSYNASLA YTSITSSTVL AATGSIFTFI FALLLKDEQF AWMKLAGVLL GVSGSCLTAL HDSSSKSSSD SDAVRNLELF GDFLGLISAV GYGAYAVQTR VLCPRDEALY SMQLLLGYIG LIDLIVLSPI AIYQSITSVQ IPLFVFLFGL LDNVISDYMW LRAVILTNAT VATVGLGLTI PLAFASDIIL GKSDVLSTGS VLGALIVLLG FVFVNIGATS I
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