Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_19762 |
Symbol | |
ID | 7200151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | - |
Start bp | 750533 |
End bp | 752998 |
Gene Length | 2466 bp |
Protein Length | 807 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179497 |
Protein GI | 219117405 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTTATTCAC CTGTCACTCC AGCGCAACGT CAACGAGCAA GCATGCTATC TCGCTTTATC GGCTTGCGAA GACTCTTTTC ATCGCACAGC AAAAACGTGC GAGTGGCGGC AGACAAACGC ACCAACATAG TCTTTGGAGC TAACACAGAT GTTGGTAAAA CTCTCGTTTC CGCTGGTCTC GTCCGGGCTG CGCTCCGACG CAACACTGTT CATTACGTCA AGCCTCTCCA ATGTGGCGGC AATGATCAGG AATTTGTAAG GAGGCACGCC TTATTGCAGC CTCGGCCTTC CAATGCGCTA TCCGCAGAGA TTTTGTTCCA GTGGGATACT CCGACCTCGC CTCATATCGC TTCACGAATG GAAAACAAGC CCCAGAGTGA CAAGCATGTA ATGGAGGCCG TCAACAAAGT TTTGGTAGAA ACAACGAACC GTTCAGGTCC TGTCACGACA ATTATTGAAA CGGCTGGTGG TGTACTCAGT CCTTCTGCCT CGTCGCCCAA CAACACGTCA GCTCGACACG CGACTTCGGA GACTGGCTGG GGATGGATAC CCCAAGCAGA CCTATATCAA CCATTACTGG GACAAACCCC GGTAGTCCTC GTCGGTGACG GCAGACTGGG TGGTATCAGT GCGACACTGT CCAGTTTGGA ATCGTTGCTG ATTCGGGGTT ACGATGTGAC GGCCCTTGTT TTGTTGGAAA CGGACTACGA CAACGTTTCG GCCATGCGCG AATATGTTTC ACGGGGTCAT AAGCTTCGAG CTGGCAATGG AGAGACGCTC TTCTCCAATC CGAACGATTC TGTGATGTCG CTACCTGCTA TTCCGTCGGA TCCACAAGTG CCTTTGGATG AATGGTATGG CTCCGATGCC GTCAAGGAAC GGTTCGAACG TCTGGACGAT TTTTTGCAAC AAAGTTGGGA AGGTCAGCTC TTGGACTTGC AAAGTTTGCG GTGTACCGGC CGACAAGTTT TGTGGTGGCC ATTTACACAG CATAGTCAGG TTCAAAGAGA CAATCAAGTT GCGCTTGTGG ACAGTGCTTC TCAGAACGAC TTGAATGTGC TCGTTGACGG CACAGACGGA ATATGTCTAG AGCGTGTATC AATGAAAGAT ATGTCAGGAA GTGAAGGGAC TCTCGGTATT GGACACGGGG ATTCTTCGCT CGCTTTGGCT AGCGCTGGTG CAGCTGGACG ATACGGTTAT GTTGCCTTCC CTCAGACAGT GCATGCACCC GCCGTCGCTT TGGGCCAAAC ACTTGTAGGT CCCCGCGGTC CAGGACAAGG GTGGGCGAAG CGTGTTTTCT TTACGGAGGA CGCAGCATCT GGAATGGAAG CGGCCCTCAA GATGGGCATG AAAACCTATA TCAAGCGAAT GCGTGAAGAA GAGAATGAAT CAATCGAATG GGTTATTTGC GGACAAGAGA ATAGTTACCA TGGTGATACA CTGGGAGTTA TGAATGCTAC TGAACCCAGC TTTTTCAATG ACGGACAGCA TCCCTGGTAT GAATGCAAAG GATTATTCCT GTCTGTTCCA ACGTTAGGTT TTCGAAACGG AGTGCTTTCC ATTTCGTTCC CGGAGGGATC TGAACTTGAG GGCACACAAA CAACGTTTGA ATCCATCGAT CACGTTTTGG ATATCGATGC ACGGATGATT TCCAGAAAAC TTCATTCGCA GTACAGGGAA CTGATTGAGA TGCAATGGCT TGTTTACGAG CATAGTAGTG TCAATAAGAA AATATCATCT GTTGTGATTG AGCCGGTGCT TTCGGCTGTC GCGGGAATGA GTTTTGTCGA TCCACTTTGG CAGAAAGCTC TAATTGCCGT TGCTGAGTCA CGCAATGTTC CTGTTATCTT TGATGAGACT ACATCGGGAC TTCAACGACT TGGAGTGATG AGCGGTCGCG ACATTTTACG GGAAGATCCC GACATCGGAG TGTACTCGAA ACTTCTCACC GGTGGAATCC TTCCACTATG TGCAACATTA ACCACCGAAG AAATATTCGA GACATTTTTG GGAGAAGACG AAACGATGGC GATGCTCCAC GGTAGTTCTC ACTGTGCTCA TGCAAGTGGC TGTACAAGCG CACTGCATGC TCTACACGCG TATGACCTAC TATCAGAGCA CTCCAGAAAA GCAAAAGTCA GCCCCAGGAT GCTTTTCGAC GCTGATTTGG TAAGAGCTAT GTCGGAACTA CCTATCGTTG AGCAGACCTT TTCGCTAGGT ACCGTTCTTT CTATTACGCT CGATGTCGAC GACGACGAGA GCGGAGACAA TGAGTGCTCG CTCATCAATG TGGCGATACG TCTTCTTCGT AAAGAATGCG TTTTTGCACG TTCGCTCGGC AATGTTATGT ATATTTTGGT CTCGCCACCG GATAATCCGG AGGATTGCTT GCATCTTTCG AAGAAAGTTT ACGACACTCT CTCAAAACTA TCTGGAGCTC GATCGATGTC ATCCATGAAG CAATAA
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Protein sequence | MLSRFIGLRR LFSSHSKNVR VAADKRTNIV FGANTDVGKT LVSAGLVRAA LRRNTVHYVK PLQCGGNDQE FVRRHALLQP RPSNALSAEI LFQWDTPTSP HIASRMENKP QSDKHVMEAV NKVLVETTNR SGPVTTIIET AGGVLSPSAS SPNNTSARHA TSETGWGWIP QADLYQPLLG QTPVVLVGDG RLGGISATLS SLESLLIRGY DVTALVLLET DYDNVSAMRE YVSRGHKLRA GNGETLFSNP NDSVMSLPAI PSDPQVPLDE WYGSDAVKER FERLDDFLQQ SWEGQLLDLQ SLRCTGRQVL WWPFTQHSQV QRDNQVALVD SASQNDLNVL VDGTDGICLE RVSMKDMSGS EGTLGIGHGD SSLALASAGA AGRYGYVAFP QTVHAPAVAL GQTLVGPRGP GQGWAKRVFF TEDAASGMEA ALKMGMKTYI KRMREEENES IEWVICGQEN SYHGDTLGVM NATEPSFFND GQHPWYECKG LFLSVPTLGF RNGVLSISFP EGSELEGTQT TFESIDHVLD IDARMISRKL HSQYRELIEM QWLVYEHSSV NKKISSVVIE PVLSAVAGMS FVDPLWQKAL IAVAESRNVP VIFDETTSGL QRLGVMSGRD ILREDPDIGV YSKLLTGGIL PLCATLTTEE IFETFLGEDE TMAMLHGSSH CAHASGCTSA LHALHAYDLL SEHSRKAKVS PRMLFDADLV RAMSELPIVE QTFSLGTVLS ITLDVDDDES GDNECSLINV AIRLLRKECV FARSLGNVMY ILVSPPDNPE DCLHLSKKVY DTLSKLSGAR SMSSMKQ
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