Gene PHATRDRAFT_19708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_19708 
SymbolFUM1 
ID7200108 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp558881 
End bp561131 
Gene Length2251 bp 
Protein Length567 aa 
Translation table 
GC content49% 
IMG OID 
Productprecursor of fumarase fumarase 
Protein accessionXP_002179239 
Protein GI219116889 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.473143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAGGTCTAGC TAGAGGGACA TCACCATGGT GATGCTCTCC ACATTGCTGC GGTCGACAAA 
CCGCTTTAAG ACCGCCGCTC ATCCTTGGAG AAAGTTGTTT TCTACCTATG ACCATTCACC
ACTGTTTGAT TCTAATATTT TTGCGAGTGA GACCGTCCAG TACAAGCGCC TCCTCGGACC
CGAATCTGTG GAATCCGTCC TCGTGAACGG CGAATCCTAC CTTTCCGTCA AGGGCGAAGC
CTTGCAAGTA CTGTCGAAAC ACGCTTTTTC GGATGTCGCG CATCTTCTTC GACCAGCTCA
CTTGCAGCAG TTGCGGAACA TTCTGGACGA CCCGGAAGCC TCGTCGAATG ATCACTTTGT
GGCTATGGAA TTGCTGAAGA ACGCCAACAT CGCAGCGGGG CGAGTTTTGC CTGGTTGTCA
GGATACGGGT ACAGCGATCG TGTTGGGTAA GAAGGGTCAC CGGGTTTTGA CGGATGGAGA
AGACGAAGCG TACCTGGCCA ATGGTGCCCA CGACGCTTAC CGCGATCTCA ATTTACGTTA
CAGCCAAGTC GCGCCCCTGG ATATGTTCGC CGAACGAAAT ACGGGCAACA ACATGCCTGC
ACAGATTGAT TTATACTCAA ACAAAGGCAA CGAATATAAA TTTATGTTTA TTGCAAAAGG
CGGTGGCTCT GCCAACAAAA CCTTTTTGTA TCAGCAAACC AAGGCTCTTC TGAATACGGG
ATCCCTGGAG GCATTTTTGG AGGAGAAGAT CAAGACCATT GGTACTTCGG CTTGTCCGCC
GTATCATCTC GCAATTGTTA TTGGTGGTCT CTCGGCCGAA CTCACACTTA AGACCGTTAA
GTTGGCCAGC ACCAAATTTT ACGATGACCT GCCAACGAGC GGCGATTCTA CGGGACGAGC
ATTCCGTGAT GTGACTTGGG AGGACTACAT TCTGAAAATG ACTCGTGGAC TAGGGATTGG
TGCTCAGTTC GGTGGCAAGT ACTTTTGTCA TGATGTAAGA GTAATCCGTT TGCCGCGGCA
TGGCGCTAGT TGTCCGGTTG GAATTGGTGT GAGCTGTTCC GCAGATCGGC AGGTACTTGG
CAAGGTAACA AAGGACGGCG TCTTTTTAGA GAGGCTTGAA GAGGATGTGA GCAAGTATTT
GCCCGACATA TTGGACGACA GTTTGTCAGA TGAAGTTGTT AAGATTGACA TGAATAGTAT
GTCAATGGAT GAGCTACGTC AAACATTATC CAAGCATCCT ATTCGTACCC GGTTGTCACT
CTCTGGGACC ATCGTTGTCG CGCGCGATAT CGCCCATGCC AAGATGCGTA AGTGGCTTTA
AGATTTTGAC TCTCATCGAA AGTGGATCGA TCTATTCTCA CCAATACCAA CGCTGTTGCA
TTCCCCTTAG TGAAACGTAT CGAAGACGGT GAAGGGTTAC CGGACTACGC AAAACAGCAC
ATTATCTATT ATGCTGGACC CGCTAAGACA CCGGAAGGAT ACGCCAGTGG TTCGTTTGGT
CCCACTACGG CCGGTCGTAT GGATGCATAC GTGGATCGAT TTATGCAAGA GGGTGGCTCT
TTTGTTTCCC TGGCCAAGGG AAACCGCAGC AAGCAGGTGA CGAATGCTTG CAAAAAGTAC
GGTGGGTTCT ATCTTGGTAG CATTGGAGGA CCAGCCGCCA TCCTGGCCAA GAACTGCATA
AAGAAGGTAA AAGTTCTGGA TAATGAGGAA GATGGCATGG AAGCAGTTTG GAAGATCGAA
GTTGAGAATT TTCCGGCTTT CATCGTTGTG GATGACAAGG GCGAAGATTT CTTTGAAGAA
TGGCTAGGTT AAATTTTTTT AGATGGTATT GTGTTCCTTC TTTCCACTAG TTAGGGTTTC
AATATTCATC GAGGGCTATC ATCCGCATTG ACAGTAAACT GCCTGCATCA CTAAAGTGTG
GCGAGGTTAG TTCTTCTATC TTCGACTTCC TCCCGCAAGA TATCCAACTG CCGCGGCAAC
AGTAGCTACA CCAGCAACGG CAGCCAATGA CTTTGGATCA ATCGAGTCAA CCAGCGATGT
TCGAGGCGGT TCTGTTGGCG CCGGAGCATC TTTTCTATTT TCATCTCGAA CTATAACTGC
ATTCTTTTTG TTCTTTTTCT TTTTATTCTT CTGCTCAGCT TCCTGTCGTA GTCGCTCCGC
GGCGCCTTCC GCGGTTCCAT AGAGCTTTTC GTCCACCGCA TACATACGCT TCTTGCCACC
TTTTCCAGCT TTGAGGACTT CGTCCAGCTT T
 
Protein sequence
MVMLSTLLRS TNRFKTAAHP WRKLFSTYDH SPLFDSNIFA SETVQYKRLL GPESVESVLV 
NGESYLSVKG EALQVLSKHA FSDVAHLLRP AHLQQLRNIL DDPEASSNDH FVAMELLKNA
NIAAGRVLPG CQDTGTAIVL GKKGHRVLTD GEDEAYLANG AHDAYRDLNL RYSQVAPLDM
FAERNTGNNM PAQIDLYSNK GNEYKFMFIA KGGGSANKTF LYQQTKALLN TGSLEAFLEE
KIKTIGTSAC PPYHLAIVIG GLSAELTLKT VKLASTKFYD DLPTSGDSTG RAFRDVTWED
YILKMTRGLG IGAQFGGKYF CHDVRVIRLP RHGASCPVGI GVSCSADRQV LGKVTKDGVF
LERLEEDVSK YLPDILDDSL SDEVVKIDMN SMSMDELRQT LSKHPIRTRL SLSGTIVVAR
DIAHAKMLKR IEDGEGLPDY AKQHIIYYAG PAKTPEGYAS GSFGPTTAGR MDAYVDRFMQ
EGGSFVSLAK GNRSKQVTNA CKKYGGFYLG SIGGPAAILA KNCIKKVKVL DNEEDGMEAV
WKIEVENFPA FIVVDDKGED FFEEWLG