Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_19708 |
Symbol | FUM1 |
ID | 7200108 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | + |
Start bp | 558881 |
End bp | 561131 |
Gene Length | 2251 bp |
Protein Length | 567 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | precursor of fumarase fumarase |
Protein accession | XP_002179239 |
Protein GI | 219116889 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.473143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AAGGTCTAGC TAGAGGGACA TCACCATGGT GATGCTCTCC ACATTGCTGC GGTCGACAAA CCGCTTTAAG ACCGCCGCTC ATCCTTGGAG AAAGTTGTTT TCTACCTATG ACCATTCACC ACTGTTTGAT TCTAATATTT TTGCGAGTGA GACCGTCCAG TACAAGCGCC TCCTCGGACC CGAATCTGTG GAATCCGTCC TCGTGAACGG CGAATCCTAC CTTTCCGTCA AGGGCGAAGC CTTGCAAGTA CTGTCGAAAC ACGCTTTTTC GGATGTCGCG CATCTTCTTC GACCAGCTCA CTTGCAGCAG TTGCGGAACA TTCTGGACGA CCCGGAAGCC TCGTCGAATG ATCACTTTGT GGCTATGGAA TTGCTGAAGA ACGCCAACAT CGCAGCGGGG CGAGTTTTGC CTGGTTGTCA GGATACGGGT ACAGCGATCG TGTTGGGTAA GAAGGGTCAC CGGGTTTTGA CGGATGGAGA AGACGAAGCG TACCTGGCCA ATGGTGCCCA CGACGCTTAC CGCGATCTCA ATTTACGTTA CAGCCAAGTC GCGCCCCTGG ATATGTTCGC CGAACGAAAT ACGGGCAACA ACATGCCTGC ACAGATTGAT TTATACTCAA ACAAAGGCAA CGAATATAAA TTTATGTTTA TTGCAAAAGG CGGTGGCTCT GCCAACAAAA CCTTTTTGTA TCAGCAAACC AAGGCTCTTC TGAATACGGG ATCCCTGGAG GCATTTTTGG AGGAGAAGAT CAAGACCATT GGTACTTCGG CTTGTCCGCC GTATCATCTC GCAATTGTTA TTGGTGGTCT CTCGGCCGAA CTCACACTTA AGACCGTTAA GTTGGCCAGC ACCAAATTTT ACGATGACCT GCCAACGAGC GGCGATTCTA CGGGACGAGC ATTCCGTGAT GTGACTTGGG AGGACTACAT TCTGAAAATG ACTCGTGGAC TAGGGATTGG TGCTCAGTTC GGTGGCAAGT ACTTTTGTCA TGATGTAAGA GTAATCCGTT TGCCGCGGCA TGGCGCTAGT TGTCCGGTTG GAATTGGTGT GAGCTGTTCC GCAGATCGGC AGGTACTTGG CAAGGTAACA AAGGACGGCG TCTTTTTAGA GAGGCTTGAA GAGGATGTGA GCAAGTATTT GCCCGACATA TTGGACGACA GTTTGTCAGA TGAAGTTGTT AAGATTGACA TGAATAGTAT GTCAATGGAT GAGCTACGTC AAACATTATC CAAGCATCCT ATTCGTACCC GGTTGTCACT CTCTGGGACC ATCGTTGTCG CGCGCGATAT CGCCCATGCC AAGATGCGTA AGTGGCTTTA AGATTTTGAC TCTCATCGAA AGTGGATCGA TCTATTCTCA CCAATACCAA CGCTGTTGCA TTCCCCTTAG TGAAACGTAT CGAAGACGGT GAAGGGTTAC CGGACTACGC AAAACAGCAC ATTATCTATT ATGCTGGACC CGCTAAGACA CCGGAAGGAT ACGCCAGTGG TTCGTTTGGT CCCACTACGG CCGGTCGTAT GGATGCATAC GTGGATCGAT TTATGCAAGA GGGTGGCTCT TTTGTTTCCC TGGCCAAGGG AAACCGCAGC AAGCAGGTGA CGAATGCTTG CAAAAAGTAC GGTGGGTTCT ATCTTGGTAG CATTGGAGGA CCAGCCGCCA TCCTGGCCAA GAACTGCATA AAGAAGGTAA AAGTTCTGGA TAATGAGGAA GATGGCATGG AAGCAGTTTG GAAGATCGAA GTTGAGAATT TTCCGGCTTT CATCGTTGTG GATGACAAGG GCGAAGATTT CTTTGAAGAA TGGCTAGGTT AAATTTTTTT AGATGGTATT GTGTTCCTTC TTTCCACTAG TTAGGGTTTC AATATTCATC GAGGGCTATC ATCCGCATTG ACAGTAAACT GCCTGCATCA CTAAAGTGTG GCGAGGTTAG TTCTTCTATC TTCGACTTCC TCCCGCAAGA TATCCAACTG CCGCGGCAAC AGTAGCTACA CCAGCAACGG CAGCCAATGA CTTTGGATCA ATCGAGTCAA CCAGCGATGT TCGAGGCGGT TCTGTTGGCG CCGGAGCATC TTTTCTATTT TCATCTCGAA CTATAACTGC ATTCTTTTTG TTCTTTTTCT TTTTATTCTT CTGCTCAGCT TCCTGTCGTA GTCGCTCCGC GGCGCCTTCC GCGGTTCCAT AGAGCTTTTC GTCCACCGCA TACATACGCT TCTTGCCACC TTTTCCAGCT TTGAGGACTT CGTCCAGCTT T
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Protein sequence | MVMLSTLLRS TNRFKTAAHP WRKLFSTYDH SPLFDSNIFA SETVQYKRLL GPESVESVLV NGESYLSVKG EALQVLSKHA FSDVAHLLRP AHLQQLRNIL DDPEASSNDH FVAMELLKNA NIAAGRVLPG CQDTGTAIVL GKKGHRVLTD GEDEAYLANG AHDAYRDLNL RYSQVAPLDM FAERNTGNNM PAQIDLYSNK GNEYKFMFIA KGGGSANKTF LYQQTKALLN TGSLEAFLEE KIKTIGTSAC PPYHLAIVIG GLSAELTLKT VKLASTKFYD DLPTSGDSTG RAFRDVTWED YILKMTRGLG IGAQFGGKYF CHDVRVIRLP RHGASCPVGI GVSCSADRQV LGKVTKDGVF LERLEEDVSK YLPDILDDSL SDEVVKIDMN SMSMDELRQT LSKHPIRTRL SLSGTIVVAR DIAHAKMLKR IEDGEGLPDY AKQHIIYYAG PAKTPEGYAS GSFGPTTAGR MDAYVDRFMQ EGGSFVSLAK GNRSKQVTNA CKKYGGFYLG SIGGPAAILA KNCIKKVKVL DNEEDGMEAV WKIEVENFPA FIVVDDKGED FFEEWLG
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