| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_19659 |
|---|
| Symbol | |
|---|
| ID | 7200211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011674 |
|---|
| Strand | + |
|---|
| Start bp | 383577 |
|---|
| End bp | 385347 |
|---|
| Gene Length | 1771 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | iron-containing dehydrogenase |
|---|
| Protein accession | XP_002179196 |
|---|
| Protein GI | 219116803 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0467483 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GCAAGGCCAC GATTCGTGCT TGACTGTGAG GAGTAGGTGA CTTGCTTCAC TGTCAGAGGA
GAGGGTGGGT CTAGTTAATC GACTGTGATT AAATTAGGTC ACTGTACTTG TTCGAATTCC
GAAGGCCGAA AGCCGGCTAC CGATTGTAAT ACCAAGGTAC TCGCGAGCCC AACGGAATGC
CGGCCAATAT AACTTACATG TGAATTCTAG AGATCTCCCA ACTCTTTGTT AACTATCAAG
GGCTGCCAGT ACCAAAGCCG GCGTGCGATC CTGTTTACAC CGTTCGGAGC TCGGTGGTTC
TTCGTCTGCA TCAGTAGACT AGGCATTTAC GGCCTACATA CACCGTGCCG CTTTTAGCCT
TGTTGCCTGT ACCATGATTG GCTCGGGACT CAGTCGAACT GCGTCGTCGT CGCGGCGTCT
GCCAACTTTC TGGCAACGAT CCGTTTTGCG CACAGTCGCT CCGGCTTTCT CGACTGCATC
GCCGCCACTG GATCCGATTT GCGAATGGGC GGCTTCCAAC GTCCGTTACG GTCCCGGTGC
CACTCGGGAA GTCGGTATGG ATCTGGCCTT GCAGTTTCGG TGTCGAAAGG TCGTAATCTT
TACCGACCCA AAAGTGCAAA CGCTCGACGG CATGAACGTC GTTTTGGAAT CATTGGAACG
GCAAAACATT GACGCGATCG TTTACAATCA AGTCCGCGTC GAACCGAACG ATGTCAGTTT
CCGACACGCC ATTGACTTTT TGTCGCGGAC GGACTACGAC GCCGTTGTGG CCTTTGGCGG
CGGCAGTGTC ATGGACACCG CCAAGGCGGC CAATTTGTAC GCTTCTCACG ACGGGTACGA
AGATTTCTAC GACTACGTCA ACGCCCCCAT TGGCAAGGGG TTACCCATCC CTGCCGGAAT
TCAACTCAAG CCCTTGATTG CTATTCCAAC CACGGCCGGC ACGGGCTCGG AAACCACCGG
CGTGGCTATC TTCGACGACA CGGCTTCGCG TTCCAAAACG GGTCTCGCGA GTCGGAGTTT
GAAACCAACA TTGGGCATTG TGGATCCCGT GCACACCCGC ACACTGCCAC CCAAAGTGGC
CACCTACGCG GGTCTCGACG TACTCTGCCA CGCCATGGAA AGCTACACCG CCCTGCCTTA
CAACCAACGT CCGGCCCCAG CGTCGCCGCT TCAGCGACCC GCCTACCAGG GATCTAATCC
AGTCTCGGAC GTCTGGAGTC TCTTTGCTCT GGAAACCTGC GTGGAGTTCC TCCCCAAGGT
CCTGGCGGAC ACCAACGACG ATGAAGCTCG GGGTAAGCTA TTGTTGGCCA GTACGGCTGC
CGGCATTGGG TTCGGCAACG CCGGCGTCCA CCTCTGCCAC GGCATGTCCT ATCCCATCGC
CTCCCAGGTC CGCGGCTACG TCGGTTACGA TCACGTGGAT CACGCTTTGG TGCCGCACGG
CCTTTCCGTC ATTGTCAACG CTCCAGCCGT TTTTGAGTGG ACGGCCTCGG CCGATCCCGA
CCGGCACGCC AAGCTCGCGC GCATTTTGGC GTCGCACCGC CTCGGCGAGG ACCACGCCAC
CAGCGTCGGG TTGGCCGACG AAATCCGGCT GTTCTGCGAA CGCATCCACG TGCCCTTGGG
GTTGCGGCAG TTTGGGTACA CTGCCGAAGA TATTCCCAGT CTCGTGCAGG GGACGCTTCC
CCAACACCGA GTGACCAAAA TTGCGCCGAA ACCAGTCGAT CGGGACGTCC TGACCAACCT
CTTTATGCGA GCTTTGGATG ACACACACTA A
|
|---|
| Protein sequence | MIGSGLSRTA SSSRRLPTFW QRSVLRTVAP AFSTASPPLD PICEWAASNV RYGPGATREV
GMDLALQFRC RKVVIFTDPK VQTLDGMNVV LESLERQNID AIVYNQVRVE PNDVSFRHAI
DFLSRTDYDA VVAFGGGSVM DTAKAANLYA SHDGYEDFYD YVNAPIGKGL PIPAGIQLKP
LIAIPTTAGT GSETTGVAIF DDTASRSKTG LASRSLKPTL GIVDPVHTRT LPPKVATYAG
LDVLCHAMES YTALPYNQRP APASPLQRPA YQGSNPVSDV WSLFALETCV EFLPKVLADT
NDDEARGKLL LASTAAGIGF GNAGVHLCHG MSYPIASQVR GYVGYDHVDH ALVPHGLSVI
VNAPAVFEWT ASADPDRHAK LARILASHRL GEDHATSVGL ADEIRLFCER IHVPLGLRQF
GYTAEDIPSL VQGTLPQHRV TKIAPKPVDR DVLTNLFMRA LDDTH
|
|---|
| |