Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11850 |
Symbol | |
ID | 7200024 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | - |
Start bp | 850912 |
End bp | 851934 |
Gene Length | 1023 bp |
Protein Length | 285 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179521 |
Protein GI | 219117453 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCCGTGT GTTTTCTCGG AACGGGCGCG GGTCGGACCT CGCTCGAACG CGGAAACTCC GCCACCGCCT TGCGCATGGG CAGCTCCACG TTCCTGTTCG ATGCCGGGGA AGGCGTGCAA ACGCAAATGA TGCGTTCCAA ACTCAAGTTC CGAGACGTGC GCAAAATATT CATCACCCAT TTACACGGAG ATCACATTTT TGGATTGCTC GGATTGCTCC TGTCGATGCA AGAGTCGGGG CGGAGTTCGC AAGAAGACTC CAAACGATAT TCCACAGAAA AGTATGCTCT ACAGATATAC GGACCCGTTG GTCTCTACAA CTTTATCGCT ATGGGACTCT CACTCAGTAT GACGGAGATA AAACGCATAT CCGTGGAAGT TTACGAACTA GAAGGCGGTT CTCGCCGATG GCTTCACCCT GGCGGGATCC GGAATTATGC GGAATTTCGA CATCGGGGCG TCAAACGGAT TTCCGTGCCC CCGAACAAGG ACGGTACCTG GACTCTTTGC GAGGCGGAGG AAATCAAAAC ACCGGAAGAC GCCCTCAGAT TTAGTAGTCG GCCCAAGGGA ATCAGGATCA AGGCTGCCGA GTTACATCAC ATTCCTAAAC TACAGTGCTT TGGCTACGTT GTCGAAGAGC CACAGACCCA ACCGATCAAT GTTGACGTCG AAAAAGCCAT GGAACTTGGC CTGCAACCTG GAAAGAAATA CAAGCTTCTC AAGGGAGGGT TCCCAGTAAT GAGCGATGAT GGTTTGAGAG AGATAAGACC AGAGGATGTC TCCGTGGGAG AGCCGGGGAA ACCCCGCAAG TTTGCACTGC TCGGTGACTG CTGTAACGTT CCACGCCCCA TGGCGGAGCT TTGCAGAAAT GCCGATGTAC TGATCCACGA AGCAACCTTC TTGGAAAGCG ACTCGGGTGA GCGAGTGGAC TTTGGTGGAC ACTCTACGTC CGCCATGGCT GGGCGGTTTG CTGACTACGT GGACGCCAAA GTTTTGCTAC TGAACCATAT TAGTCCAGCC TAC
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Protein sequence | LSVCFLGTGA GRTSLERGNS ATALRMGSST FLFDAGEGVQ TQMMRSKLKF RDVRKIFITH LHGDHIFGLL GLLLSMQESG RKKYALQIYG PVGLYNFIAM GLSLSMTEIK RISVEAEEIK TPEDALRFSS RPKGIRIKAA ELHHIPKLQC FGYVVEEPQT QPINVDVEKA MELGLQPGKK YKLLKGGFPV MSDDGLREIR PEDVSVGEPG KPRKFALLGD CCNVPRPMAE LCRNADVLIH EATFLESDSG ERVDFGGHST SAMAGRFADY VDAKVLLLNH ISPAY
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