Gene PHATRDRAFT_11850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11850 
Symbol 
ID7200024 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp850912 
End bp851934 
Gene Length1023 bp 
Protein Length285 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179521 
Protein GI219117453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCCGTGT GTTTTCTCGG AACGGGCGCG GGTCGGACCT CGCTCGAACG CGGAAACTCC 
GCCACCGCCT TGCGCATGGG CAGCTCCACG TTCCTGTTCG ATGCCGGGGA AGGCGTGCAA
ACGCAAATGA TGCGTTCCAA ACTCAAGTTC CGAGACGTGC GCAAAATATT CATCACCCAT
TTACACGGAG ATCACATTTT TGGATTGCTC GGATTGCTCC TGTCGATGCA AGAGTCGGGG
CGGAGTTCGC AAGAAGACTC CAAACGATAT TCCACAGAAA AGTATGCTCT ACAGATATAC
GGACCCGTTG GTCTCTACAA CTTTATCGCT ATGGGACTCT CACTCAGTAT GACGGAGATA
AAACGCATAT CCGTGGAAGT TTACGAACTA GAAGGCGGTT CTCGCCGATG GCTTCACCCT
GGCGGGATCC GGAATTATGC GGAATTTCGA CATCGGGGCG TCAAACGGAT TTCCGTGCCC
CCGAACAAGG ACGGTACCTG GACTCTTTGC GAGGCGGAGG AAATCAAAAC ACCGGAAGAC
GCCCTCAGAT TTAGTAGTCG GCCCAAGGGA ATCAGGATCA AGGCTGCCGA GTTACATCAC
ATTCCTAAAC TACAGTGCTT TGGCTACGTT GTCGAAGAGC CACAGACCCA ACCGATCAAT
GTTGACGTCG AAAAAGCCAT GGAACTTGGC CTGCAACCTG GAAAGAAATA CAAGCTTCTC
AAGGGAGGGT TCCCAGTAAT GAGCGATGAT GGTTTGAGAG AGATAAGACC AGAGGATGTC
TCCGTGGGAG AGCCGGGGAA ACCCCGCAAG TTTGCACTGC TCGGTGACTG CTGTAACGTT
CCACGCCCCA TGGCGGAGCT TTGCAGAAAT GCCGATGTAC TGATCCACGA AGCAACCTTC
TTGGAAAGCG ACTCGGGTGA GCGAGTGGAC TTTGGTGGAC ACTCTACGTC CGCCATGGCT
GGGCGGTTTG CTGACTACGT GGACGCCAAA GTTTTGCTAC TGAACCATAT TAGTCCAGCC
TAC
 
Protein sequence
LSVCFLGTGA GRTSLERGNS ATALRMGSST FLFDAGEGVQ TQMMRSKLKF RDVRKIFITH 
LHGDHIFGLL GLLLSMQESG RKKYALQIYG PVGLYNFIAM GLSLSMTEIK RISVEAEEIK
TPEDALRFSS RPKGIRIKAA ELHHIPKLQC FGYVVEEPQT QPINVDVEKA MELGLQPGKK
YKLLKGGFPV MSDDGLREIR PEDVSVGEPG KPRKFALLGD CCNVPRPMAE LCRNADVLIH
EATFLESDSG ERVDFGGHST SAMAGRFADY VDAKVLLLNH ISPAY