Gene PHATRDRAFT_11793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11793 
Symbol 
ID7200164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp130842 
End bp131630 
Gene Length789 bp 
Protein Length263 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179368 
Protein GI219117147 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.601681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCCGTC TCAACGGTTT GAATACGCTT TCTATCACTC GTAACCATAT GACTGGGACT 
ATCCCGCCGG AGCTGTTTTC GATGAGGAAT CTGGAAAACC TGTTCCTCTA CGCGAATCAA
ATGCGTGGGT CCATCCCTAG TGAAGTCGCC AACGCAAAGA AACTGAAAAT TTTGTCGGCC
GGTAACAACC TGTTCGCTGG TACTCTCGTC TCCGAAATCG GCCAAGTCAG TACGCTGGAA
CAGTTGGACA TTGGCTTCAA CGAGTTCTGG CTTAGACTCC CTACCGAAAT GGGTCAGCTA
ACGAACATGA AATACCTTGT AATCGAGGAC AATCGATTCT CGGGGCCAAT GCCTAGTGAA
TTTGGGCGTA TGAGTAACTT GGAAACCTTT TTGCTGTCCC AGAATCTAAT GAAGGGACCT
CTGCCGATTG ATCTCACCAA CCTTTCTAAT CTGCATGAGT GGCGATTTGC CCATACCGGA
TTGGGAGGTG ACTTCCCGAC CGAGTTTGGA CAAGCCATGA CCAACCTGCA TCGTCTCGAA
ATGGGCGGAA ATAACTTTCG TGGAACCATC ATGACCGAGT TTGGCTACAT GACCCAGTTG
TCGTGGCTAG CGCTCAACGG CAACGACCTC ACGGGGACTA TTCCGACCGA AATTGGTCAC
CTGGTTAACA TGACTAGACT GTCACTTCAG GATACCTTGA TCGAAGGGAC GATTCCGTCG
GAGATTGGTC TGATGACCAA GCTTGAGAAT CTTAATATTG ACAAAAACAA TTTGACCGGA
CGCGCTCCG
 
Protein sequence
MVRLNGLNTL SITRNHMTGT IPPELFSMRN LENLFLYANQ MRGSIPSEVA NAKKLKILSA 
GNNLFAGTLV SEIGQVSTLE QLDIGFNEFW LRLPTEMGQL TNMKYLVIED NRFSGPMPSE
FGRMSNLETF LLSQNLMKGP LPIDLTNLSN LHEWRFAHTG LGGDFPTEFG QAMTNLHRLE
MGGNNFRGTI MTEFGYMTQL SWLALNGNDL TGTIPTEIGH LVNMTRLSLQ DTLIEGTIPS
EIGLMTKLEN LNIDKNNLTG RAP