Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11793 |
Symbol | |
ID | 7200164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | - |
Start bp | 130842 |
End bp | 131630 |
Gene Length | 789 bp |
Protein Length | 263 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179368 |
Protein GI | 219117147 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.601681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCCGTC TCAACGGTTT GAATACGCTT TCTATCACTC GTAACCATAT GACTGGGACT ATCCCGCCGG AGCTGTTTTC GATGAGGAAT CTGGAAAACC TGTTCCTCTA CGCGAATCAA ATGCGTGGGT CCATCCCTAG TGAAGTCGCC AACGCAAAGA AACTGAAAAT TTTGTCGGCC GGTAACAACC TGTTCGCTGG TACTCTCGTC TCCGAAATCG GCCAAGTCAG TACGCTGGAA CAGTTGGACA TTGGCTTCAA CGAGTTCTGG CTTAGACTCC CTACCGAAAT GGGTCAGCTA ACGAACATGA AATACCTTGT AATCGAGGAC AATCGATTCT CGGGGCCAAT GCCTAGTGAA TTTGGGCGTA TGAGTAACTT GGAAACCTTT TTGCTGTCCC AGAATCTAAT GAAGGGACCT CTGCCGATTG ATCTCACCAA CCTTTCTAAT CTGCATGAGT GGCGATTTGC CCATACCGGA TTGGGAGGTG ACTTCCCGAC CGAGTTTGGA CAAGCCATGA CCAACCTGCA TCGTCTCGAA ATGGGCGGAA ATAACTTTCG TGGAACCATC ATGACCGAGT TTGGCTACAT GACCCAGTTG TCGTGGCTAG CGCTCAACGG CAACGACCTC ACGGGGACTA TTCCGACCGA AATTGGTCAC CTGGTTAACA TGACTAGACT GTCACTTCAG GATACCTTGA TCGAAGGGAC GATTCCGTCG GAGATTGGTC TGATGACCAA GCTTGAGAAT CTTAATATTG ACAAAAACAA TTTGACCGGA CGCGCTCCG
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Protein sequence | MVRLNGLNTL SITRNHMTGT IPPELFSMRN LENLFLYANQ MRGSIPSEVA NAKKLKILSA GNNLFAGTLV SEIGQVSTLE QLDIGFNEFW LRLPTEMGQL TNMKYLVIED NRFSGPMPSE FGRMSNLETF LLSQNLMKGP LPIDLTNLSN LHEWRFAHTG LGGDFPTEFG QAMTNLHRLE MGGNNFRGTI MTEFGYMTQL SWLALNGNDL TGTIPTEIGH LVNMTRLSLQ DTLIEGTIPS EIGLMTKLEN LNIDKNNLTG RAP
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