Gene PHATRDRAFT_11741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11741 
Symbol 
ID7199927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp54597 
End bp55865 
Gene Length1269 bp 
Protein Length422 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179349 
Protein GI219117109 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTACCTGCTC TGCGGGATGG GCCGCCGACG AAACGAGAAG AATTGTTCGT TGCGAAGCTC 
AAGCTTTGTT CCGTTATCTT TTCGTTTGAC GACCCCACGG CTGACAAGCG AGGCAAGGAC
ATGAAGCGTC AAACTCTCCT TGAACTCGTA GACTTTGTCA ATACTCCGGC TGGTCAAAAG
GTCTTTACCG AATCCGTCAT GGGCGATCTC ATGGCCATGG TCTCCGCTAA CGTCTGCCGG
GCGCTACCGC CTGCCACGGA CGACTTTGAC CCCGAAGAAG ATGAACCTGT CCTGGAACCC
GCTTGGCCTC ATCTGCAAGT CGCGTACGAA TTCTTCTTAC GCTTCATTGT AAGTTCCGAA
GTTAACGCAA AGGCGGCTAA AAAGTACGTG GACCAAAAGT TTTGCCTGCA GCTCGTTGAA
CTCTTTGACA GCGAGGATCC ACGGGAACGC GATTACCTCA AAACCATATT GCACCGGATC
TACGGCAAGT TTATGTCGCA CCGCTCATTC ATTCGACGGG CCATTTCGAA CGTCTTTTAT
CGTTTTGTGT ACGAAACGGA ACGCCACAAC GGAATCGGGG AGCTCTTGGA AATTCTTGGA
TCCATTATCA ATGGCTTCGC TATTCCGCTC AAAAAGGAGC ATTTGCAGTT CTTGGCCCGG
GCACTGATTC CTTTGCACAA GCCCAAATGT GTCGCATTGT ACCACCAGCA ACTTTCGTAC
TGTATTATTC AATACGTGGA AAAGGATGCT GACACGGCTA CGCCCATCCT GAATGGCTTT
TTCAAGTGCT GGCCGTGGAG CAATTCGGGA AAGCAAGTCA TGTTCCTGAA CGAACTCGAA
GAAATTTTGG AGTTGCTCGG TGCCGATCAA CTCGCCCAGG TGTCAACTAT GCTTTTTACA
AATTTGGCTC GTTGTCTCGA TTCCGATCAC TTTCAGGTCG TCGAACGGGC TTTGTTTTTA
TGGAACAATG AACATTTGGT GAATTCAGGT TGCCTGTCCC GATTGAATGC TCAAACAGTC
CTGCCGATTA TCTATGGCCC TCTCTACAAG AATTCGTCGG GACATTGGAA TGCGACGGTG
GAAGGATTGG CCCAAAATGT CTTGAAAATG TACATGGAGT ATGACCTGGC TTTGTATGAC
CGGTGCACGG CAGCCTACTT TCGCGAAGAA GAAGAGGCTA AAAAGAAACT GGAAGCGCTG
CAGGACAAAT GGGCCTTGAT CGAAAAGGAG GCCAACAGCA TCGCACCCGC GCTTCTATTG
GCCAAGTGA
 
Protein sequence
LPALRDGPPT KREELFVAKL KLCSVIFSFD DPTADKRGKD MKRQTLLELV DFVNTPAGQK 
VFTESVMGDL MAMVSANVCR ALPPATDDFD PEEDEPVLEP AWPHLQVAYE FFLRFIVSSE
VNAKAAKKYV DQKFCLQLVE LFDSEDPRER DYLKTILHRI YGKFMSHRSF IRRAISNVFY
RFVYETERHN GIGELLEILG SIINGFAIPL KKEHLQFLAR ALIPLHKPKC VALYHQQLSY
CIIQYVEKDA DTATPILNGF FKCWPWSNSG KQVMFLNELE EILELLGADQ LAQVSTMLFT
NLARCLDSDH FQVVERALFL WNNEHLVNSG CLSRLNAQTV LPIIYGPLYK NSSGHWNATV
EGLAQNVLKM YMEYDLALYD RCTAAYFREE EEAKKKLEAL QDKWALIEKE ANSIAPALLL
AK