Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11741 |
Symbol | |
ID | 7199927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | - |
Start bp | 54597 |
End bp | 55865 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179349 |
Protein GI | 219117109 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTACCTGCTC TGCGGGATGG GCCGCCGACG AAACGAGAAG AATTGTTCGT TGCGAAGCTC AAGCTTTGTT CCGTTATCTT TTCGTTTGAC GACCCCACGG CTGACAAGCG AGGCAAGGAC ATGAAGCGTC AAACTCTCCT TGAACTCGTA GACTTTGTCA ATACTCCGGC TGGTCAAAAG GTCTTTACCG AATCCGTCAT GGGCGATCTC ATGGCCATGG TCTCCGCTAA CGTCTGCCGG GCGCTACCGC CTGCCACGGA CGACTTTGAC CCCGAAGAAG ATGAACCTGT CCTGGAACCC GCTTGGCCTC ATCTGCAAGT CGCGTACGAA TTCTTCTTAC GCTTCATTGT AAGTTCCGAA GTTAACGCAA AGGCGGCTAA AAAGTACGTG GACCAAAAGT TTTGCCTGCA GCTCGTTGAA CTCTTTGACA GCGAGGATCC ACGGGAACGC GATTACCTCA AAACCATATT GCACCGGATC TACGGCAAGT TTATGTCGCA CCGCTCATTC ATTCGACGGG CCATTTCGAA CGTCTTTTAT CGTTTTGTGT ACGAAACGGA ACGCCACAAC GGAATCGGGG AGCTCTTGGA AATTCTTGGA TCCATTATCA ATGGCTTCGC TATTCCGCTC AAAAAGGAGC ATTTGCAGTT CTTGGCCCGG GCACTGATTC CTTTGCACAA GCCCAAATGT GTCGCATTGT ACCACCAGCA ACTTTCGTAC TGTATTATTC AATACGTGGA AAAGGATGCT GACACGGCTA CGCCCATCCT GAATGGCTTT TTCAAGTGCT GGCCGTGGAG CAATTCGGGA AAGCAAGTCA TGTTCCTGAA CGAACTCGAA GAAATTTTGG AGTTGCTCGG TGCCGATCAA CTCGCCCAGG TGTCAACTAT GCTTTTTACA AATTTGGCTC GTTGTCTCGA TTCCGATCAC TTTCAGGTCG TCGAACGGGC TTTGTTTTTA TGGAACAATG AACATTTGGT GAATTCAGGT TGCCTGTCCC GATTGAATGC TCAAACAGTC CTGCCGATTA TCTATGGCCC TCTCTACAAG AATTCGTCGG GACATTGGAA TGCGACGGTG GAAGGATTGG CCCAAAATGT CTTGAAAATG TACATGGAGT ATGACCTGGC TTTGTATGAC CGGTGCACGG CAGCCTACTT TCGCGAAGAA GAAGAGGCTA AAAAGAAACT GGAAGCGCTG CAGGACAAAT GGGCCTTGAT CGAAAAGGAG GCCAACAGCA TCGCACCCGC GCTTCTATTG GCCAAGTGA
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Protein sequence | LPALRDGPPT KREELFVAKL KLCSVIFSFD DPTADKRGKD MKRQTLLELV DFVNTPAGQK VFTESVMGDL MAMVSANVCR ALPPATDDFD PEEDEPVLEP AWPHLQVAYE FFLRFIVSSE VNAKAAKKYV DQKFCLQLVE LFDSEDPRER DYLKTILHRI YGKFMSHRSF IRRAISNVFY RFVYETERHN GIGELLEILG SIINGFAIPL KKEHLQFLAR ALIPLHKPKC VALYHQQLSY CIIQYVEKDA DTATPILNGF FKCWPWSNSG KQVMFLNELE EILELLGADQ LAQVSTMLFT NLARCLDSDH FQVVERALFL WNNEHLVNSG CLSRLNAQTV LPIIYGPLYK NSSGHWNATV EGLAQNVLKM YMEYDLALYD RCTAAYFREE EEAKKKLEAL QDKWALIEKE ANSIAPALLL AK
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