Gene PHATRDRAFT_11733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11733 
Symbol 
ID7200237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp486765 
End bp487844 
Gene Length1080 bp 
Protein Length359 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179224 
Protein GI219116859 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0139004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCTTTGATTC GAAAGTACTT GACTGAGGCC GTGTACAACG ATCTTAAAGA CAAGGAAACG 
ACCAATGGTG TATGCTTGGA CCATATGATT CGTGGAGCGG TGTCTCTACC ATGGGGTGCC
AAACCTCCCC GAGGGATTGG GGGAGTATAT GCCGGTGATG CCGAATCGTA TCAAGTTTTT
GCCCCGCTGC TTGACCCACT TATTGAAGAC CATCATCATG CGGACTACCG TCTCCGAGGT
CAGCTTCGAC GACACCGCAC AAATCTTAAT CCGCGGCAGC TCCTCCAGCA GCGACTTGAC
CCCGATGGCC AATACATTCT ATACACACGT ATGCGTCTAG CACGCTCGAT CGAGGGATTT
CGCTTCTCGC CTTGCATTAG TGTGGCAGAG CGACGGCAGG TTGAAGCTAT ATTGAAAAAT
TGTATAAAGG ACTGGAAGCA TGGTAATAAA GACTCGGAAT ATATATCTGT GATGAACATG
ACAAATGAAC AGCATCAGAG TCTACTACAA AGGCAGCTCT TATTCCCTGA TCCCGATCCC
TTTGCTCTGT GTGCTGGTAC ACACCGTGAC TGGCCGGACG CTCGCGGAGT GTACTGTGAT
GATTGGCAGG ATCCCAAGAT ATTGATATGG TGCAATGGGG AAGATCATCT GTGGATTATC
AGTAACGCCA AGGGTGGGGA TGTCCAGGGT GTTTTTACTC GATTGTCGAC GTCCGTGTGG
GCACTGGAGA CTTCGTTGGA GGGACGCGGG CATGCTTTCG TCGAAGACAA ACGCCTGGGA
TTCCTCAACG CATCACCGAC CAATATCGGA CCAGCCCTTC GTGCTAGCGT CTTCGTCAAG
TTAGTTCGTC TAGGTCGACA TCCAGATTTT GAAAACTTGA TTCGGCGACT GAAGTTGGAA
GCTCGTGTGT ACGAGGAAAC TGATAGGCGA TACACAGGTA TATTCGATAT CGCAAACTCC
GAAGCCCTTG GCAAGAGCGA AGTGGAATTG ATCAATGTAA TGATCGAAGG TGTCGGCAAA
CTCATAGAAC TTGAGAAAAG TTTGGAAAAC GGTGACGTAC TAGACTTGAA TGCAGCCTAA
 
Protein sequence
SLIRKYLTEA VYNDLKDKET TNGVCLDHMI RGAVSLPWGA KPPRGIGGVY AGDAESYQVF 
APLLDPLIED HHHADYRLRG QLRRHRTNLN PRQLLQQRLD PDGQYILYTR MRLARSIEGF
RFSPCISVAE RRQVEAILKN CIKDWKHGNK DSEYISVMNM TNEQHQSLLQ RQLLFPDPDP
FALCAGTHRD WPDARGVYCD DWQDPKILIW CNGEDHLWII SNAKGGDVQG VFTRLSTSVW
ALETSLEGRG HAFVEDKRLG FLNASPTNIG PALRASVFVK LVRLGRHPDF ENLIRRLKLE
ARVYEETDRR YTGIFDIANS EALGKSEVEL INVMIEGVGK LIELEKSLEN GDVLDLNAA