Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11690 |
Symbol | |
ID | 7200304 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | + |
Start bp | 211108 |
End bp | 211945 |
Gene Length | 838 bp |
Protein Length | 251 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179158 |
Protein GI | 219116727 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCATCA TGTCGACTCA TCCCAAAGAT TTTGAACGGG TTCGGGATCT TTCACATGAT TTGAAGTTAC ACCAACCCGA CGATTTGAAA ATTGTGCCCT GTTTCGGCGT TCACCCGTGG TGGGTGTCAG AATTGACGCA AGAGGATTGG CAAGAAGACT CCGCTCGTGA TGCACTACCA CGATGGCTAG TGGAGGTAGA AGACATGCTA GTCACTTACC CGCATTCAAT CGTGGGTGAA ATCGGACTGG ATGGCTTTCA TTTTGATAGG GCGACAGGAG GGTTGAAGGC ACCTATGGCA AAGCAAGTCG AAGTTTTTCG TTTACAAATG GAACTCGCCG CCAAGCATCA GCGACCCGTG AGTATCCATA CTGTGCAATG CTTTGGAGTA CTTATGGATA CTTTGTCGAT TATAAAAAAA TCCACGGTAA AGCTCCCACC GAAAATGTAT TTTCATGCGT TTGGAGGAAA GCAAGGCACG ATTGATCAGC TGTTGGCTCT TTGTGGGAGA GAACCGGGAA AGGTCTACTT TGGCTTTGCC CCAGTCATCA GTAAGTGTGA TAAATCATTT GGCTTCTCCC TATTTTTTCA CCGTACCAGT ATACCTAACT TTTTGCGCTG GTACAAACGA AGATTTCCGA TCGCCAAAAA CGGCCGATGT TGTACGGAAG GTTGGCCTTG ACCGTTTAGT GCTGGAGTCT GACCATGAGG ATGCTCAGTT CGTGCCCAAA AGCATTGAAG ACTGCGTCGA CTTCTTAGCT AGCTCACTGG ACGTCGGAGA GGAGGAAGTT ATTCAGCAGA CAACACGGAA CGCGTTTTCC TTTTATGGTT TGGATTAA
|
Protein sequence | MAIMSTHPKD FERVRDLSHD LKLHQPDDLK IVPCFGVHPW WVSELTQEDW QEDSARDALP RWLVEVEDML VTYPHSIVGE IGLDGFHFDR ATGGLKAPMA KQVEVFRLQM ELAAKHQRPV SIHTVQCFGV LMDTLSIIKK STVKLPPKMY FHAFGGKQGT IDQLLALCGR EPGKVYFGFA PVINFRSPKT ADVVRKVGLD RLVLESDHED AQFVPKSIED CVDFLASSLD VGEEEVIQQT TRNAFSFYGL D
|
| |