Gene PHATRDRAFT_11690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11690 
Symbol 
ID7200304 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp211108 
End bp211945 
Gene Length838 bp 
Protein Length251 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179158 
Protein GI219116727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATCA TGTCGACTCA TCCCAAAGAT TTTGAACGGG TTCGGGATCT TTCACATGAT 
TTGAAGTTAC ACCAACCCGA CGATTTGAAA ATTGTGCCCT GTTTCGGCGT TCACCCGTGG
TGGGTGTCAG AATTGACGCA AGAGGATTGG CAAGAAGACT CCGCTCGTGA TGCACTACCA
CGATGGCTAG TGGAGGTAGA AGACATGCTA GTCACTTACC CGCATTCAAT CGTGGGTGAA
ATCGGACTGG ATGGCTTTCA TTTTGATAGG GCGACAGGAG GGTTGAAGGC ACCTATGGCA
AAGCAAGTCG AAGTTTTTCG TTTACAAATG GAACTCGCCG CCAAGCATCA GCGACCCGTG
AGTATCCATA CTGTGCAATG CTTTGGAGTA CTTATGGATA CTTTGTCGAT TATAAAAAAA
TCCACGGTAA AGCTCCCACC GAAAATGTAT TTTCATGCGT TTGGAGGAAA GCAAGGCACG
ATTGATCAGC TGTTGGCTCT TTGTGGGAGA GAACCGGGAA AGGTCTACTT TGGCTTTGCC
CCAGTCATCA GTAAGTGTGA TAAATCATTT GGCTTCTCCC TATTTTTTCA CCGTACCAGT
ATACCTAACT TTTTGCGCTG GTACAAACGA AGATTTCCGA TCGCCAAAAA CGGCCGATGT
TGTACGGAAG GTTGGCCTTG ACCGTTTAGT GCTGGAGTCT GACCATGAGG ATGCTCAGTT
CGTGCCCAAA AGCATTGAAG ACTGCGTCGA CTTCTTAGCT AGCTCACTGG ACGTCGGAGA
GGAGGAAGTT ATTCAGCAGA CAACACGGAA CGCGTTTTCC TTTTATGGTT TGGATTAA
 
Protein sequence
MAIMSTHPKD FERVRDLSHD LKLHQPDDLK IVPCFGVHPW WVSELTQEDW QEDSARDALP 
RWLVEVEDML VTYPHSIVGE IGLDGFHFDR ATGGLKAPMA KQVEVFRLQM ELAAKHQRPV
SIHTVQCFGV LMDTLSIIKK STVKLPPKMY FHAFGGKQGT IDQLLALCGR EPGKVYFGFA
PVINFRSPKT ADVVRKVGLD RLVLESDHED AQFVPKSIED CVDFLASSLD VGEEEVIQQT
TRNAFSFYGL D