Gene PHATRDRAFT_11653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11653 
Symbol 
ID7200198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp303360 
End bp303884 
Gene Length525 bp 
Protein Length174 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179402 
Protein GI219117215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0432988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTTCGACCCG ACATTTTGCA CCAAGAGATT CTGGCACTCT TGGATTCACC CTTGAACAAG 
GCTGGTCTTT TGAAGATTTA TATACACACA CAAACAAAAG TACTGATCGA TGTCAATTCA
TCAATTCGGA TTCCTCGAAC CTACAAACGA TTCGCTGGTC TTTTCGTGCA ACTTTTGCAT
AAGATGAAAA TCAAGGCCGG AACGGAATCG ACGACTCTAC TCAAAGTCAT CAAAAACCCT
TTTTCCCAAT ACCTTCCCGC TGGAACTCAT GTCTATGGAA TGAGCTGTCA AGGCAAACTA
TACAGTCCTA TCTCCTTGGC AAAATCTCTT TTACCGGCAA CCCTCGAGGC CAGCAAACAA
ACTCCAACTT GCTTCATTGT CGGAGCTATG TCAACCGGAC ACATCACGCT CGAAGATCAT
CCGTACATTG AGCACATGTT TTCTATTTCT GAGTACCCAC TTTCCGGTGC AGCCGCCCTG
TCGCGGATTA TGGGTGGCGT TGAGCATCAC TGGGGTATTT GTTAG
 
Protein sequence
FRPDILHQEI LALLDSPLNK AGLLKIYIHT QTKVLIDVNS SIRIPRTYKR FAGLFVQLLH 
KMKIKAGTES TTLLKVIKNP FSQYLPAGTH VYGMSCQGKL YSPISLAKSL LPATLEASKQ
TPTCFIVGAM STGHITLEDH PYIEHMFSIS EYPLSGAAAL SRIMGGVEHH WGIC