| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45022 |
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| Symbol | |
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| ID | 7199531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011673 |
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| Strand | + |
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| Start bp | 1029212 |
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| End bp | 1031163 |
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| Gene Length | 1952 bp |
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| Protein Length | 513 aa |
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| Translation table | |
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| GC content | 58% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178898 |
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| Protein GI | 219116206 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000948434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTTTGTTTCC GGACAATCGA AACGATCGTA TCCACTTGGA ACCAACACAC ACACACAAAG
TAGGTCCCGT GAGTCCTTCC TTCGAACAAC AAACAAACAA ACAAACAGCT ACGTGAACGC
AACTTCTAGA GGCAATCTTG TCTTCGAGAA GCAGAATTTC TCCCGAGAAC AAACCCGGCA
CTTTATTCCA TCATGTCGGG TGAAAGCTAT CCTTCGGAAT CTCCGGAAAT TCCGACATCG
CGTCCAGCAG ATTCCACCCA CAAAGCGAGA AAATCCGACG GCCGTAAGGC TGATGCGGAC
CGGAATCCTG TTCATTCCAA GCAAAGCGAT CCCGCACCGC ACGAAACGGA CATGCTCGCG
GACCCCGCAA CGACCCTCTC CCCCTTCCCC ACGGATCAAA CCTCGTCTCC GGCTTGGCAC
TACCAGCATC ATCCGCCACC ACCACACGCC TACTACTATC CGCCCTCGCC GTACGGCTAC
ACCGGGGTAC CGCCGTACCC GGGAGGACCT CCACCGCCCT ACGGACCATC CTATCCACCC
CCCTTCTTTC CAACCGCACC GGGAGCCTAT TACCCACCTC CCCCGGGATA CGCACCTCCC
GGCTCCCCGT CACCGTCCCG CAGTGATGGT CACATGAACG AGCACGGGCA TGCGTCTTCG
CCGGGACGCG GCGAAGCCGG AGGCTACGGG ATGCCCTACC CCCCACCGCC CTACGATCCC
TACCAACCTC CGCCCTACGG CTCGGCCTAC CCGATCGGGG CGCCGCCCCT TAGTCCACGC
CATCCCGTCT ATTCCAATGG ACTACCGCCA CACAGTCCGG ACGCCAACGG GGTTTCCTCG
AAGCATCCGC ATTCGTCGAC GAATCCCCCG CCCTTGGAAG ACCTCGACAC GGCCTCCGAT
TCCGGCAAAA CATCGGCCGT CGAACCCGCG GTGTCAGCAA ATGAACTCCG GAAACTCAAG
ACCTACATTC GGCCACCGGC ACCGTCCAAT CCCGAAGTGG TCGCCCGTCG CCAACACAAG
AACTCTCAGA GTCGTCGCCG CGCCGCTGTT CTGAGGGACC GGGTTGCCGC CGTCGCCGCC
ATGGATGCTA CCAAACGTAC CGAAGAAGAT CAACACATGT TGCACCTACA CGAGACGCGT
CGGGAACGGA AAAATAATAG GTCACGAGAA CGCGCTCTCG AACGCAAGGA AGAGATGGAT
CGTATCCTTG GCAAGAAAAT ACGACAACGT ACACGACTCG AAGTGCAGTT TTTGAATAAC
ACAATGTCCA AGAAGCAGCG AAAGAATGAA GGCGATCGTT TACGTCGGGC TCGACTCAAG
GCGCTCGGAT TGGACGCACG TAACGGGGCC GCCAAAAAGC CCGGTGTTCC GGCGCGTGGA
CCACTCCCTC CGCATCTCTT GGATCCACAA CGGCAGCATT TACCCTTGGA TCCGCAACAA
CAGCATCATC ATCACAACCG ACCGCCACCG TCGCCGCGTT TCATGCCTCC CGCACTAGCG
TATCACCAAC ACGCTTCACC GCAGCCGCAA CCGTACTACA CACACCGGTT CACCATTCCC
GCACAGCACC CAAGTGTTGG AGCTCCCTGG CACCCGACCG CACCCACAAC GTACGCGCAC
CAGGAATTTG CCAAACACGC CGAAGGCAAC AGCGTTGCCA AATCCGAGGC GGTTGTGGAC
GCCAATACCG TAACGCCAGC GTCGCCAAAC GAAGTCGACG GTGTTTCCGT TTGAATAGAC
GGTGAGAAGC CGACGACGAT CTGCATAGTG AGGAATGCAA CTACGGCCGT AGGAAGGAAT
CAGGAATGGT ATATTTCGTA GTTTTATGTA AGAAAAATGG CTCGCGGTGG AGCCTGGGCA
ATTGCACATG TGAAAGTCTA GTCATGGACC TGTGGGAGAG CTGTGTTGAT GGGGTGGGAA
AGGAGTCTCG GAAAGAGAAG ATGACCAAGG CT
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| Protein sequence | MSGESYPSES PEIPTSRPAD STHKARKSDG RKADADRNPV HSKQSDPAPH ETDMLADPAT
TLSPFPTDQT SSPAWHYQHH PPPPHAYYYP PSPYGYTGVP PYPGGPPPPY GPSYPPPFFP
TAPGAYYPPP PGYAPPGSPS PSRSDGHMNE HGHASSPGRG EAGGYGMPYP PPPYDPYQPP
PYGSAYPIGA PPLSPRHPVY SNGLPPHSPD ANGVSSKHPH SSTNPPPLED LDTASDSGKT
SAVEPAVSAN ELRKLKTYIR PPAPSNPEVV ARRQHKNSQS RRRAAVLRDR VAAVAAMDAT
KRTEEDQHML HLHETRRERK NNRSRERALE RKEEMDRILG KKIRQRTRLE VQFLNNTMSK
KQRKNEGDRL RRARLKALGL DARNGAAKKP GVPARGPLPP HLLDPQRQHL PLDPQQQHHH
HNRPPPSPRF MPPALAYHQH ASPQPQPYYT HRFTIPAQHP SVGAPWHPTA PTTYAHQEFA
KHAEGNSVAK SEAVVDANTV TPASPNEVDG VSV
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